Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05345 ATGACTCACAGTGATAATCCTATGATTTTCGTAGTTGGTATTCTAGGTAACATTGCCTCCTTCTTTTGCTTTATAGCACCCATATCAATATTTTATCGAATTGTTAAGAAGAAAGCAACCGATGGTTTCCAATCAGTTCCATATGTGGCTGCACTCTTCAGTGCCATGCTTTGGATATTTTATGCTTACATTAAAACGGGTGAAATGCTTATCATTACCATCAATTTATTCGGTTGTGCAATTGAAACAATTTACCTCGCCATCTATATGATATACTGCCCCAGAAAAGCTAGGATCTTCACAGTGAAGCTGATTTGCTTGTTAAACTTGGGTGGAATTTGCTTGGTTGTTGTTCTAACACATGTTCTAGCAAAAGAAAGAACTGCTCGTATTGAACTTCTTGGATGGATTTGTGTAGTTCTCTCAACTAGTGTGTTTGCAGCACCTTTAAGCATTATTAGAGTGGTTATTCGAACCAAAAGTGTAGAGTTTATGCCTTTCACTCTTTCACTCCTTCTCACAATTAGTGCAATTTTGTGGCTCACTTATGGTATTCTCCTCAAAGATATCTTTGTTACACTTCCGAACTTTGTGGGTATCACATTTGGAACAATTCAGATGGTGTTGTATGCAATATACAGAAACAACAAGCCTGTGAATGATGAAAAGCTACCGGAACACAAAGAAGATAACAATAACAATGACAATCAGTTGCAGGTAATAGTGATTCCTACTCAAAACATGGTTGATGTCGAATTAGGGGATACTAATAATAATAATAATAAGGAAGAGAAACAACAAGAGAAGAAACAGGAACAAGTAGAACCAAGGGAAGGCAATATTGAACTACAACAACAGAAAGAGGGTTGA 870 0.3667 MTHSDNPMIFVVGILGNIASFFCFIAPISIFYRIVKKKATDGFQSVPYVAALFSAMLWIFYAYIKTGEMLIITINLFGCAIETIYLAIYMIYCPRKARIFTVKLICLLNLGGICLVVVLTHVLAKERTARIELLGWICVVLSTSVFAAPLSIIRVVIRTKSVEFMPFTLSLLLTISAILWLTYGILLKDIFVTLPNFVGITFGTIQMVLYAIYRNNKPVNDEKLPEHKEDNNNNDNQLQVIVIPTQNMVDVELGDTNNNNNKEEKQQEKKQEQVEPREGNIELQQQKEG 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05345 289 MobiDBLite consensus disorder prediction 252 289 - -
Trre7g05345 289 FunFam Bidirectional sugar transporter SWEET 130 222 - -
Trre7g05345 289 FunFam Bidirectional sugar transporter SWEET 10 98 - -
Trre7g05345 289 Coils Coil 253 273 - -
Trre7g05345 289 Gene3D - 128 224 - -
Trre7g05345 289 MobiDBLite consensus disorder prediction 257 289 - -
Trre7g05345 289 Gene3D - 8 96 - -
Trre7g05345 289 PANTHER RAG1-ACTIVATING PROTEIN 1 14 261 IPR047664 -
Trre7g05345 289 Pfam Sugar efflux transporter for intercellular exchange 133 217 IPR004316 GO:0016020
Trre7g05345 289 Pfam Sugar efflux transporter for intercellular exchange 11 96 IPR004316 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05345 Trre-Chr7 59610252 59612506 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05345 3 273 Miscellaneous Gene Families AT5G23660 47.619 1.95e-85 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05345 K15382 - gmx:100801430 368.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05345 7 59610252 59612506 Trre5g04693 5 48857237 48859058 PCT