Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04693 ATGTCTTCCCACCATAGTCATCTATCTTTTGCCTTTGGAGTTCTAGGCAACATTTCATCCTTTGTATGCTTTCTGGCACCACTACCAACATTTTATAGAATTTGTAAAAAGAAATCAACCGAAGGGTTCCAATCAATTCCTTATGTGGCTGCACTATTCAGTGCAATGCTTTGGATGTTTTATGCCTATACCAAGACCGGTGAAACTCTTCTTATCACCATTAATGCATTTGGTTGTGTGATAGAGACAATTTATCTTGCCATTTATGTCACTTACGCCCCCAAGAAAGTTAGGGCGTCGACAGTGAGGATGATCGTGTTGATGAACTTTGTGGGATTTGGCGCGATTGTCTTGTTAACTCACTTCATGTTTCAAGATGGAGAAAAACGTATCAAGCTTCTTGGATGGATTTGTGTAGTTTTTGCCACTAGTGTTTTTGCAGCCCCTTTAAGTATAATTAGGGTTGTTATTCGCACCAAAAGTGTTGAATTCCTTCCATTTCCTCTTTCACTTCTCCTCCTCATAAGCGCCATTATGTGGCTCTTGTATGGTCTTTCGCTCAGAGATATCTATGTTACTCTCCCGAATGTTGTGGGGTTAACATTTGGAATTGTTCAGATCACACTATATGCAATGTATAGAAAATCTAAGCCAGTAAATGACGAGAAACTACCAGAACACAAAGGAGATATTATCATCAACAAAAACGAATTTGAACCAACCAATGATGAGAAGAAAATTGAAGTGAAAGTTGACATAGAAATTGTTGAGAAAAAAGAAGAAGAGAAGAAACAAGAACAAGTAGTAACAAAGGAAAAGAGTGACAAAGACAAGATTGATGATAACAAGAAAACAGAGGAAGTAAAGAGTGGTTGTGAAGAATAA 885 0.3763 MSSHHSHLSFAFGVLGNISSFVCFLAPLPTFYRICKKKSTEGFQSIPYVAALFSAMLWMFYAYTKTGETLLITINAFGCVIETIYLAIYVTYAPKKVRASTVRMIVLMNFVGFGAIVLLTHFMFQDGEKRIKLLGWICVVFATSVFAAPLSIIRVVIRTKSVEFLPFPLSLLLLISAIMWLLYGLSLRDIYVTLPNVVGLTFGIVQITLYAMYRKSKPVNDEKLPEHKGDIIINKNEFEPTNDEKKIEVKVDIEIVEKKEEEKKQEQVVTKEKSDKDKIDDNKKTEEVKSGCEE 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04693 294 Gene3D - 129 224 - -
Trre5g04693 294 FunFam Bidirectional sugar transporter SWEET 10 98 - -
Trre5g04693 294 Gene3D - 11 97 - -
Trre5g04693 294 MobiDBLite consensus disorder prediction 261 294 - -
Trre5g04693 294 FunFam Bidirectional sugar transporter SWEET 130 222 - -
Trre5g04693 294 PANTHER RAG1-ACTIVATING PROTEIN 1 14 258 IPR047664 -
Trre5g04693 294 Pfam Sugar efflux transporter for intercellular exchange 11 96 IPR004316 GO:0016020
Trre5g04693 294 Pfam Sugar efflux transporter for intercellular exchange 133 217 IPR004316 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04693 Trre-Chr5 48857237 48859058 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g04693 1 277 Miscellaneous Gene Families AT5G50800 50.680 8.05e-93 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04693 K15382 - gmx:100810426 385.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04693 5 48857237 48859058 Trre5g04693 5 48857237 48859058 ECH
Trre7g05345 7 59610252 59612506 Trre5g04693 5 48857237 48859058 PCT