Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05315 ATGGTACTATCTCATAATCATCATCAAGAACTGCATCCAGAAAGAAAAAGAGAGGAACATCAACAAAAAAACAGCAATGTTACTAGTACTAGTAGTATTGATGAACAAGAACAAGAAGAAGCATTGTTTGCTCTCGTCGAACACCACCATTGTCAAGTCAAAAAACTCCGTTACTATGTTTCCACTTACACAGTCAAGCTTAGGGAAGCAGAAGAGAAGTTACGAAGTTCTGAATCCAAATTGGCTTTTTTTCAAGGTAAGACTAATGGAAAGACAAAACATGGATCAAACAGTTTCAATCATAAAAATGAAACTCCTTCCAAAATCCATCATCAATCAAAGCCTCAAAGCACACGGTTACCGGATTCTGCAAAAGCTTCAATGAATTATAGTAATTATGATGCTAACCGGTCAACTTTTAGTACTCAGAGACTTCCTACTGATCTGGATGATGTCAGAGGAACAAAAAGGAAGTTTGAAATAAAGGGGCAAAAGGATTTGGAACCTTTCATAGGTAGAAGTTCTTTAGCACTATCGGTGAACTGTGGAAAGAAAAGCTACATATCAAGTCTACACAACAAGAAATTGAGAAATCTTGCTCTATGTCCTGTGAATGATCAGCATTTTGTGACTAGTGCTTTGGATAGAGTGGTGCGCCTGTGGGAAGTTCACTCTGGAGGATCAAGAATCAATTTGATTAGCACGACTGATTGTGCAACTGAAGAGCAGAAGCGGTGGCCGGAAGATATAGCTTGGTATCCAGATGGAAAGAGTCTTTTTTCAGTATATAGTGCTGATAGTCAAGACTCTCAAGTATCAGTTACAGAATTTAAAGAAGGTGAAAGGAGTGCACAAGTCAGTTTCTTGGAAGACAAGCCTCATGTTAAGGGTGTTATCAATAGCATTGTTTTTCTTCCATGGGAAAATACCTGTTTTGCAACAGCAGGAACTGACCATAGTGTTATGCTATGGAGTGAGAATGTTGAGAAAAAATGGAAGCCGGAAGCATTGCATAGGAATTATCATACTTCTGCTGTCATGGGAGTCGCTGGTGTTCAGCACAAGAAACTCGTGTTGTCTGTTGGTAAAGACAGAAGAATTTTGGCGTACAATGCGGAAGAAGGAAAACAAGATTTCATGCTTCAAGTTGATAGTAAATGCTTAAGTATCTTGCCAAATCCACGCGACTTCAATTTGTTCATGGTTCAAACAGGGACTCATGATAAGCAACTTCGACTATTTGATATTCGATTGAAGCAGAAAGAGGTTCATGCATTTGGATGGAAGCAAGAAAGCAGTGATACACAATCAGCTTTGGTAAATCAAGATTGGTCTCCAAGTGGACTTTACATAACATCAGGTTCAGCTGATCCATTAATTCACATATTTGATATTAGATTTAATGGTCACAAGCCTTCTCAATCTATTGAAGCTCATAAAAAACGAGTTTTCAAAGCCATGTGGCATAAGTCTCTTCCACTTCTCATTTCCATATCATCTGATCTCAACATTGGATTACATAAGTTTATGTAG 1533 0.3823 MVLSHNHHQELHPERKREEHQQKNSNVTSTSSIDEQEQEEALFALVEHHHCQVKKLRYYVSTYTVKLREAEEKLRSSESKLAFFQGKTNGKTKHGSNSFNHKNETPSKIHHQSKPQSTRLPDSAKASMNYSNYDANRSTFSTQRLPTDLDDVRGTKRKFEIKGQKDLEPFIGRSSLALSVNCGKKSYISSLHNKKLRNLALCPVNDQHFVTSALDRVVRLWEVHSGGSRINLISTTDCATEEQKRWPEDIAWYPDGKSLFSVYSADSQDSQVSVTEFKEGERSAQVSFLEDKPHVKGVINSIVFLPWENTCFATAGTDHSVMLWSENVEKKWKPEALHRNYHTSAVMGVAGVQHKKLVLSVGKDRRILAYNAEEGKQDFMLQVDSKCLSILPNPRDFNLFMVQTGTHDKQLRLFDIRLKQKEVHAFGWKQESSDTQSALVNQDWSPSGLYITSGSADPLIHIFDIRFNGHKPSQSIEAHKKRVFKAMWHKSLPLLISISSDLNIGLHKFM 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05315 510 ProSiteProfiles Trp-Asp (WD) repeats profile. 189 231 IPR001680 GO:0005515
Trre7g05315 510 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 121 509 - -
Trre7g05315 510 SUPERFAMILY WD40 repeat-like 183 507 IPR036322 GO:0005515
Trre7g05315 510 Coils Coil 60 87 - -
Trre7g05315 510 SMART WD40_4 282 325 IPR001680 GO:0005515
Trre7g05315 510 SMART WD40_4 182 222 IPR001680 GO:0005515
Trre7g05315 510 SMART WD40_4 333 371 IPR001680 GO:0005515
Trre7g05315 510 SMART WD40_4 427 464 IPR001680 GO:0005515
Trre7g05315 510 SMART WD40_4 469 508 IPR001680 GO:0005515
Trre7g05315 510 MobiDBLite consensus disorder prediction 7 23 - -
Trre7g05315 510 Gene3D - 387 509 IPR015943 GO:0005515
Trre7g05315 510 Gene3D - 153 386 IPR015943 GO:0005515
Trre7g05315 510 MobiDBLite consensus disorder prediction 85 103 - -
Trre7g05315 510 Pfam WD domain, G-beta repeat 441 464 IPR001680 GO:0005515
Trre7g05315 510 MobiDBLite consensus disorder prediction 1 35 - -
Trre7g05315 510 MobiDBLite consensus disorder prediction 85 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05315 Trre-Chr7 59368194 59371439 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05315 - - tpra:123914527 874.004
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05315 7 59368194 59371439 Trre5g04753 5 49368495 49373206 PCT