Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05310 ATGGGTATTTGGAAATTTAGTTTTTTAGGGTTTCTTTTTGTTTCTTTTCTCTTTACAATTGATGCTATTCAGCTGCACATGAATCAGCCAACTGAAAGAATTTCAGGCAGTGCTGGTGATGTATTGGAAGATGATCCGGTTGGAAGGTTGAAGGTTTTTGTTTATGAGCTTCCAAGTAAATATAATAAGAAAATTCTGCAAAAGGACCCAAGATGCCTTGCCCATATGTTTGCTGCTGAGATATTTATGCACCGGTTTCTCCTATCTAGTGCTGTTCGAACCCTTAATCCTGAAGAGGCTGATTGGTTTTATACTCCTGTCTACACAACCTGTGACTTGACACCAAATGGCCTCCCTTTACCCTTTAAATCACCGCGAATGATGAGAAGTGCCATACAGCTTATTTCTTCTAACTGGCCCTATTGGAATCGAACAGAGGGGGCAGATCATTTCTTTGTGGTTCCTCATGACTTTGGGGCATGTTTTCATTACCAAGAAGAGAAAGCAATTGAAAGAGGGATTCTTCCATTGCTGCAGCGTGCTACCTTGGTTCAAACATTTGGACAGAGAAATCATGTGTGCTTGAAAGAGGGCTCAATTACTATTCCTCCATATGCTCCACCACAGAAAATGCATACCCACTTGATTCCTGATAAGACTCCCAGGTCCATTTTTGTATACTTCCGTGGACTGTTTTATGATGTTGGAAATGACCCCGAAGGTGGATACTATGCAAGAGGTGCAAGAGCAGCGGTATGGGAGAACTTTAAGAACAATCCATTATTTGACATTTCCACGGAGCATCCTGCCACATATTACGAGGACATGCAACGAGCTGTGTTTTGCCTATGCCCACTTGGATGGGCCCCTTGGAGCCCAAGATTGGTTGAAGCTGTGGTATTTGGTTGCATCCCTGTTATTATTGCGGATGATATTGTTCTTCCGTTTGCCGATGCAATTCCGTGGGAAGAGATTGGGGTGTTTGTTGATGAGCAGGATGTTCCTAAATTGGATACCATACTCACATCTATACCTCCAGAAGTTATACTAAGAAAACAGAGATTGCTTGCTAATCCTTCCATGAAGCAAGCAATGTTATTTCCTCAACCTGCACAAGCTGGAGACGCTTTCCATCAAGTTTTAAATGGACTTGCACGGAAGTTGCCGCATGAAAGGCGTATTTTCTTGAAACCAGGGGAGAAGAGCTTGAATTGGACTGCTGGCCCTGTGGGTGACCTTAAACCTTGGTAA 1251 0.4293 MGIWKFSFLGFLFVSFLFTIDAIQLHMNQPTERISGSAGDVLEDDPVGRLKVFVYELPSKYNKKILQKDPRCLAHMFAAEIFMHRFLLSSAVRTLNPEEADWFYTPVYTTCDLTPNGLPLPFKSPRMMRSAIQLISSNWPYWNRTEGADHFFVVPHDFGACFHYQEEKAIERGILPLLQRATLVQTFGQRNHVCLKEGSITIPPYAPPQKMHTHLIPDKTPRSIFVYFRGLFYDVGNDPEGGYYARGARAAVWENFKNNPLFDISTEHPATYYEDMQRAVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWEEIGVFVDEQDVPKLDTILTSIPPEVILRKQRLLANPSMKQAMLFPQPAQAGDAFHQVLNGLARKLPHERRIFLKPGEKSLNWTAGPVGDLKPW 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05310 416 Pfam Exostosin family 49 344 IPR040911 -
Trre7g05310 416 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 48 383 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05310 Trre-Chr7 59340343 59343391 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05310 K20870 - gmx:100812747 808.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05310 7 59340343 59343391 Trre7g05310 7 59340343 59343391 ECH
Trre7g05310 7 59340343 59343391 Trre5g04427 5 46285014 46287568 PCT