Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04427 ATGAAAGCTTTTAACAAATCTTCTTCTTTCTCCACTAATTCTTCTCAATTTTTCACTCTCTTTTTCTTCTTCACACTATCACTAACTGCAATAATTCTTGTTTCTTGTTGGAATCATTCTCCAAATATCTCACCATTTTTTGTTTCTTGGCAATGGAAAGGTGAACAAAACACTTCCTCATTTTCTCCATATGGTTCTCATGATGGTGAAAAGTTTAACACAAACTTTAAGCATAAAGGTGTAAACAAAAAGAACCTTAGAGATCATAAATACACCAAGTTGGAAAGAATTGAATCAAAATTGGTTAAAGCAAGGTATTCAATCAAAGAAGCTAGCAGAATTCGAAATTCGACATCAACTCATCATGACCAAGATTATGTTCCTCGTGGTCCAATTTACAGAAATGCCAATGCTTTTCATAGGAGTTACTTAGAGATGGAAAAAATGTTCAAGATTTTTGTGTATGAGGAAGGGGAGCCACCAATGTTTCATAATGGTTTAAGCAAAGATATATACTCAACAGAAGGATTATTCATACATGAAATGGAAATTGGAAGATACTATCGTACTAATGATCCAAATGAAGCTTTTGTGTATTTTCTACCTTTCAGTGTGGTTATGATGGTTGAATATATCTATGTGCCAGGCACATATGATAGAACTTCTGTTGGTCTTTCTATAAGTGATTATATACAGATTATATCTCATAAATATCCTTTCTGGAATCAGTCCTTAGGTCATGATCATTTCATGGTCTCTTGTCATGATTGGGGACCACTTGCATCTGCATACGTGGACAACTTGTTCAATAATTCAATAAGGGTACTTTGCAATGCAAATGCATCAGAAGGATTCAAGCCATCAAAAGATGTATCATTCCCTGAAGTGTTTCTCAAGACAGGAGAACTCACAGGTTTACTAGGAGGGTACCCTACATCTCAAAGGACAACCCTTGCTTTCTTTGCAGGTCACTTGCATGGTCACATAAGATACCTACTCCTCAAAACATGGAAAAACAAAGACCAAGATGTTCAAGTTTATGATGAAATTCCTGAGGATGTTTCTTACCACACAAAGCTTAGAACCAGCAAGTTTTGTTTGTGTCCAAGTGGTTATGAAGTAGCAAGTCATAGAATAACTGAAGCAATATTTTCAGAATGTGTGCCTGTATTAATTTCTGATAACTATGTTCCACCTTTTAGTGATGTTTTGAATTGGAAAGCATTTTCAGTTCAAATAGATGTGAAGGACATTCCTAATATTAAGAAGATACTTATGGGAATTTCACAAAGACAATACTTGAAGATGCATAGAAGAGTGAAACAAGTGCAAAGACATTTTGTTCCTAATGATCCACCAAAGAGGTTTGATGTTTTTCATATGACTATCCATTCTATTTGGCTCAGAAGGTTGAACTTGAACATCCATATTCATGATGATGATGATCAGTGA 1452 0.3485 MKAFNKSSSFSTNSSQFFTLFFFFTLSLTAIILVSCWNHSPNISPFFVSWQWKGEQNTSSFSPYGSHDGEKFNTNFKHKGVNKKNLRDHKYTKLERIESKLVKARYSIKEASRIRNSTSTHHDQDYVPRGPIYRNANAFHRSYLEMEKMFKIFVYEEGEPPMFHNGLSKDIYSTEGLFIHEMEIGRYYRTNDPNEAFVYFLPFSVVMMVEYIYVPGTYDRTSVGLSISDYIQIISHKYPFWNQSLGHDHFMVSCHDWGPLASAYVDNLFNNSIRVLCNANASEGFKPSKDVSFPEVFLKTGELTGLLGGYPTSQRTTLAFFAGHLHGHIRYLLLKTWKNKDQDVQVYDEIPEDVSYHTKLRTSKFCLCPSGYEVASHRITEAIFSECVPVLISDNYVPPFSDVLNWKAFSVQIDVKDIPNIKKILMGISQRQYLKMHRRVKQVQRHFVPNDPPKRFDVFHMTIHSIWLRRLNLNIHIHDDDDQ 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04427 483 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 29 466 IPR004263 GO:0006486|GO:0016757
Trre5g04427 483 Pfam Exostosin family 147 426 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04427 Trre-Chr5 46285014 46287568 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04427 - - aprc:113868893 700.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04427 5 46285014 46287568 Trre5g04427 5 46285014 46287568 ECH
Trre7g05310 7 59340343 59343391 Trre5g04427 5 46285014 46287568 PCT