Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05279 ATGAGTTCTCCAATTCGTGCCCCTTCAACTTCTTCTTGCTCATATATTCGTCCTCATTCATGCCTCACTTGTGCTTCTCGTAATTTCAAGTTTCCTCTGCTATTGCCACAGGCAATCTGTACCACTCCTAAGGTGTACCGTTGCTCTGGAGGCCATATGGAGGCTTCTAGTAACGCTAATCCGTTGAAAACTTGTATAGTTGGCAAATTTACTCCAGGATGGTCTGAAGCACAGCCCTTGGTTTCCAAGCAATCGTTCAACAGGCACCTGTTACCTGTGGAAGCTTTAGTAACTTCAACAACTCAAGATGTTTCTGATACACCTCTTATTGGTGATGATAAGATCGGAGTGTTATTGTTAAACCTTGGAGGTCCAGAGACTCTAGATGATGTGCAGCCTTTTTTGTTTAACCTTTTTGCTGATCCAGATATTATACGATTGCCAAGGTTATTTAGTTTTCTTCAAAAGCCATTAGCTCAATTTGTATCTGTTTTAAGAGCGCCAAAGAGCAAAGAAGGCTATGCTTCCATTGGCGGTGGATCCCCTCTTAGACGTATGACTGATGCACAGGCAGAAGAGTTAAGAAAATCTCTATTTGAAAAGGATGTCCCCGCCAAAGTGTATGTTGGCATGCGTTATTGGCATCCATTCACCGAAGAAGCTATTGAAGAGATTAAAAGGGATGGAATTACAAAGCTTGTCGTGCTTCCACTTTATCCACAATTTTCAATTTCAACCAGTGGTTCAAGTTTGCGTCTCTTGGAGAGTATATTCCGAGAAGATGAGTATCTAGTCAACATGCAGCACACGGTAATACCTTCGTGGTACCAACGCGAAGGATACATAAAGGCCATGGCAAATTTAATCGAAAAAGAGCTGAAGAGTTTTGATTTCCCAGAGAAGGTCATGATATTCTTTAGTGCACATGGGGTGCCAGTTGCTTACGTGGAAAAGGCTGGCGATCCATATAAGGCAGAGATGGAGGAATGTGTGGACTTGATCATGGAAGAGCTTGAGAAAAGAAAGATTGCTAATGCATACACGCTTGCTTATCAGAGTAGAGTTGGACCTGTGGAATGGTTAAAACCCTATACAGATGAGACAATAATTGAACTAGGGAAAAAGGGAGTAAAACGTTTGTTGGCTGTACCTATTAGCTTTGTCAGTGAACATATTGAAACACTGGAAGAAATTGATGTTGAGTACAAAGAATTGGCTTTAGAATCTGGAATAGAAAAATGGGGACGTGTTCCTGCTCTCGGATGTGAGCCGACTTTCATTTCAGACTTGGCAGATGCTGTAATTGAGAGTCTCCCATATGTTGGTGCAATGGCAGTTTCTAACATTGAAGCTCGACAGTCTTTGGTTCCCCTGGGCAGTGTTGAAGAATTATTGGCAGCATATGACTCGCAACGTAGGGAGTTGCCGCCACCAGTATTGGTGTGGGAATGGGGATGGACAAAAAGTGCTGAAACTTGGAATGGAAGAGCAGCTATGATTGCTGTGCTGCTTCTGTTGTTTCTAGAAGTAACCACTGGAGAGGGATTTTTGCACCAGTGGGGAATATTGCCCTTGTTTAGATGA 1584 0.4268 MSSPIRAPSTSSCSYIRPHSCLTCASRNFKFPLLLPQAICTTPKVYRCSGGHMEASSNANPLKTCIVGKFTPGWSEAQPLVSKQSFNRHLLPVEALVTSTTQDVSDTPLIGDDKIGVLLLNLGGPETLDDVQPFLFNLFADPDIIRLPRLFSFLQKPLAQFVSVLRAPKSKEGYASIGGGSPLRRMTDAQAEELRKSLFEKDVPAKVYVGMRYWHPFTEEAIEEIKRDGITKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYIKAMANLIEKELKSFDFPEKVMIFFSAHGVPVAYVEKAGDPYKAEMEECVDLIMEELEKRKIANAYTLAYQSRVGPVEWLKPYTDETIIELGKKGVKRLLAVPISFVSEHIETLEEIDVEYKELALESGIEKWGRVPALGCEPTFISDLADAVIESLPYVGAMAVSNIEARQSLVPLGSVEELLAAYDSQRRELPPPVLVWEWGWTKSAETWNGRAAMIAVLLLLFLEVTTGEGFLHQWGILPLFR 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05279 527 PANTHER FERROCHELATASE 112 464 IPR001015 GO:0004325|GO:0006783
Trre7g05279 527 SUPERFAMILY Chelatase 113 444 - -
Trre7g05279 527 ProSitePatterns Ferrochelatase signature. 304 325 IPR019772 GO:0004325|GO:0006783
Trre7g05279 527 Gene3D - 276 419 - -
Trre7g05279 527 NCBIfam ferrochelatase 113 438 IPR001015 GO:0004325|GO:0006783
Trre7g05279 527 SUPERFAMILY Chlorophyll a-b binding protein 482 522 - -
Trre7g05279 527 CDD Ferrochelatase_N 115 277 IPR033659 -
Trre7g05279 527 CDD Ferrochelatase_C 283 421 IPR033644 -
Trre7g05279 527 Hamap Coproporphyrin III ferrochelatase [cpfC]. 113 438 IPR001015 GO:0004325|GO:0006783
Trre7g05279 527 FunFam Ferrochelatase 114 292 - -
Trre7g05279 527 Pfam Ferrochelatase 114 437 IPR001015 GO:0004325|GO:0006783
Trre7g05279 527 Gene3D - 114 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05279 Trre-Chr7 59089889 59094998 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05279 K01772 - gmx:100803481 947.192
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05279 7 59089889 59094998 Trre7g05279 7 59089889 59094998 ECH
Trre7g05279 7 59089889 59094998 Trre5g04426 5 46278357 46283286 PCT