Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04426 ATGAAGTTTCCAATTACAACTCCTGCCACGTCATCACCTTCTACTTCTTCCTCTTATACACTTAATCCTCCTCCTTGTCTCACTCATGCTTCTCCTAATTTCAAGCGTCCTATGCTGTTGCCACAAACAATTTGTGCCTCTCAAAAAAAGTCTTTCTGCTCTGGAGCCCATGTGGAGGCTTCTGTTAACTGTAATCCCGTGAAAAATTACACAACAGTCAGTTTTTCTCCACGGCGATTTGAAGCAAAATTTTTGGTTTCCAACCAATCACTCAAGAAACACTCATTCTCGGTGGGAGCTTTAGTAACTCCAACAGCTCAAGATGTTTCCGATACAAGTTCAACTCTTACTACTGATGATAAGATTGGAGTGTTATTGCTAAACCTTGGAGGTCCAGAGACTCTAGAAGATGTGCAACCTTTTTTATTTAACCTTTTTGCTGATCCGGATATTATACGATTGCCAAGAATATTTAGTTTTCTTCAAAAGCCATTGGCCCAATTTGTATCTGTTCTAAGGGCCCCAAAGAGCAGAGAAGGCTATGCTTCAATTGGCGGTGGTTCTCCTCTTAGACGTATAACCGATGCACAGGCTGAAGAGTTGAAGAAATCTCTTTCGGGAAAAAATGTCCCTGCTGAAGTGTATGTTGGCATGCGTTACTGGCATCCATTCACCGAGGAAGCTATTGAACAGATTAAAAAAGATGGAATTACAAAGCTGGTCGTTCTCCCACTTTATCCACAATTTTCAATATCAACCAGTGGCTCGAGCTTACGTCTACTGGAGAGTATATTCCGAGATGATGAGTATCTAGTCAACATGCAGCACACGGTATTACCTTCATGGTATCAACGTGAAGGATACATAAAGGCCATGTCAAATTTAATTGAAAAAGAGCTGAAGAGTTTCGACTGCCCTAAGGAGGTCATGATATTCTTTAGTGCGCATGGTGTGCCTCTTGCTTATGTGGAAGAGGCTGGTGATCCATACAAGGCAGAGATGGAGGAATGTGTGGATTTGATCATGGAAGAACTAGAGACAAGAAAGATAAGCAATGCCTTCACCCTTGCCTATCAGAGTAGAGTTGGACCAGTGGAATGGTTAAAACCATATACAGACGAGACAATAGTTGAACTCGGAAAAAAGGGAGTGAGAAGTCTGCTGGCTGTTCCAATTAGCTTTGTCAGTGAACATATTGAAACACTGGAAGAAATAGATGTTGAATACAAAGAATTAGCTCTAGAATCTGGTATAGAAAAGTGGGGCCGTGTTCCTGCTCTAGGATGTGAACCCTCCTTCATTTCTGATTTGGCAGATGCTGTTATTGAAAGTCTTCCGTATGTTGGTGCCATGGCAGTTTCAAACCTCCAAGCTCGACAGCCTTTGGTTCCGCTCGGAAGCGTAGAGGAGTTATTAGCAGCCTACGACTCGCAACATAGGGAGTTGCCATCGCCGGTGATAGTGTGGGAATGGGGTTTGACAAAAAGTGCTGAAACTTGGAATGGAAGAGTAGCTATGTTGGCTGTGCTGCTTCTTTTGTTTTTTGAAGTCACTACACCTGATAGTGTTTTTCACCAGTTGGGAATATTATCGCCTGCGCATAGGTGA 1608 0.4266 MKFPITTPATSSPSTSSSYTLNPPPCLTHASPNFKRPMLLPQTICASQKKSFCSGAHVEASVNCNPVKNYTTVSFSPRRFEAKFLVSNQSLKKHSFSVGALVTPTAQDVSDTSSTLTTDDKIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRIFSFLQKPLAQFVSVLRAPKSREGYASIGGGSPLRRITDAQAEELKKSLSGKNVPAEVYVGMRYWHPFTEEAIEQIKKDGITKLVVLPLYPQFSISTSGSSLRLLESIFRDDEYLVNMQHTVLPSWYQREGYIKAMSNLIEKELKSFDCPKEVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELETRKISNAFTLAYQSRVGPVEWLKPYTDETIVELGKKGVRSLLAVPISFVSEHIETLEEIDVEYKELALESGIEKWGRVPALGCEPSFISDLADAVIESLPYVGAMAVSNLQARQPLVPLGSVEELLAAYDSQHRELPSPVIVWEWGLTKSAETWNGRVAMLAVLLLLFFEVTTPDSVFHQLGILSPAHR 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04426 535 NCBIfam ferrochelatase 119 445 IPR001015 GO:0004325|GO:0006783
Trre5g04426 535 SUPERFAMILY Chlorophyll a-b binding protein 489 529 - -
Trre5g04426 535 CDD Ferrochelatase_N 122 284 IPR033659 -
Trre5g04426 535 PANTHER FERROCHELATASE 116 470 IPR001015 GO:0004325|GO:0006783
Trre5g04426 535 FunFam Ferrochelatase 121 299 - -
Trre5g04426 535 ProSitePatterns Ferrochelatase signature. 311 332 IPR019772 GO:0004325|GO:0006783
Trre5g04426 535 Pfam Ferrochelatase 121 444 IPR001015 GO:0004325|GO:0006783
Trre5g04426 535 Gene3D - 283 426 - -
Trre5g04426 535 MobiDBLite consensus disorder prediction 1 21 - -
Trre5g04426 535 CDD Ferrochelatase_C 290 428 IPR033644 -
Trre5g04426 535 Hamap Coproporphyrin III ferrochelatase [cpfC]. 120 445 IPR001015 GO:0004325|GO:0006783
Trre5g04426 535 Gene3D - 121 444 - -
Trre5g04426 535 SUPERFAMILY Chelatase 120 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04426 Trre-Chr5 46278357 46283286 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04426 K01772 - gmx:100785669 846.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04426 5 46278357 46283286 Trre5g04426 5 46278357 46283286 ECH
Trre7g05279 7 59089889 59094998 Trre5g04426 5 46278357 46283286 PCT