Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05264 ATGGGGGGTCTTTGTTCTAAGTCTACAAAAAGTGACAAGGTGTTTGCAAAGAAGAAAGAACATTATGATAATCATAAATCTGGTGTTGGTGGTGGTAATAAGAATAATCATAAGCATACTACTAGTGATTTGACAAGTGCAAAAGAGGGAATTGATAAGAAAAAGGAAGAAGAAGAAGCTGTTGCTGCTGCTATTGCTTCTGGAACTAGTGCTGAAGATTTTTATGATGGAATTCCACGTTATGCTGATTCTTTTTCACATAAGTCTAGGTCAGTAAGATCAAGACAAGCTGCTGTGGCTAAGGTCTCGGAAGTGAGTTCACGCCTAGGCAGAGCTGGCACTAAAGGATTTGGGAAAGCGGTTGACGTTTTGGACACACTTGGGAGTAGCATGACAAATTTAAATTCTGGTGGCGGCTTTGCATATGGAGCTGTAACAAAGGGGAATGAAGTTGGTATTTTAGCATTTGAGGTTGCAAATACTATTGTCAAGGGTTTTACTCTAATGGAATCTCTTTCGACAAAAAATATTAAACATCTGAAAGAAGAAGTGCTTACATTAGAAGGTATTCAAGATTTAGTATCAAAGGATATGGACGAACTTCTAAGGATAGTTGCTGCAGACAAGAGGGATGAATTGAAAGTATTTTCTGATGAGGTGATTCGTTTTGGAAATCGTTCAAAGGATCCTCAGTGGCACAACTTGGATCGATACTTTGAGAAAATTAGCAGAGAACTTAATTCTCAAAGACAAACAAAGGAGGAGGCAGAATTATTAATGCAGCATTTGATGAATTTAGTTCAACATACAGCGGAATTATACCATGAGTTACATGCTTTGGATAGATTTGCACAAGATTATCAGCATAAGCGTGATGAGGAGGACAATCCAAGTGCAGCTCATAGCGGTGATAGCCTTTCAATCTTGAAGGCAGAACTTAGAAGTCAAAAGAAGCACGTTAAGCATTTGAAGAAAAAGTCACTATGGTCCAGAAGTTTGGAGGAGGTTATGGAGAAGCTTGTAGACATAGTCCACTTTTTGCATTTGGAGATAAATAAATCCTTTGGCAGTGAAGATGGACCTAAACCATTTATTCAATCCAAAAGCAATCGCCAAAGATTGGGTCCTGCTGGCCTCTCTTTGCATTATGCAAATATAGTGCTCCAAATGGATACTCTAGTAGCTAGATCTGGTTCTATGCCTGCAAATACGAGGGACACATTATATCAGAGCTTGCCACCTAATATAAAATTAACTTTGCGTTCCAAATTACCTACGTTTCATGTTGCAGAAGAGCTCACTGTAGCAAATATTAAACAGGAGATGGAGAAAACATTGCATTGGTTGGTTCCGATTGCTACAAATACAGCCAAAGCGCATCATGGTTTTGGTTGGGTTGGAGAGTGGGCAAGCACGGGATCTGATCTAAATAAGAAAACCACGAAGACTGATGTAATGCGAATTGAAACATTTCACCATGCAGATAAAGAAAAAGTAGAAAACTATATTCTTGAACTTCTCTTGTGGCTTCACCGATTGGCAGTTAAAAGTAAAGCCGGGGGTGATGTTGGAGAAGTGAAGTCTGCCATCAGGTCTCATGTCGGCACTGTCCTGCAAAAGACAACTCAACAATCTACAAATGCGGTATCGCCATTGCTAACAACAGATGAGCAGATCATGCTGAAAGATGTCAGTAACAAAATTCCTGTTAGAGGGATCAGCAAAAGTAAAAGCTTGGACTTTGACAGAGTGAAAACAGCGTTGACAGATAACAGTAAACTGATTAAAAGTAACAGTTACTCAACGACAAGTAGAAATAAGGAATTTTCTTATAACAGAATTTGTTCTAAGGTTCCTGTGATTGATTTTGGTATTGACAAAAAGAGAGCATTGGATGTGATTGACAGAGTAAATGTGGCCAGATAA 1926 0.3889 MGGLCSKSTKSDKVFAKKKEHYDNHKSGVGGGNKNNHKHTTSDLTSAKEGIDKKKEEEEAVAAAIASGTSAEDFYDGIPRYADSFSHKSRSVRSRQAAVAKVSEVSSRLGRAGTKGFGKAVDVLDTLGSSMTNLNSGGGFAYGAVTKGNEVGILAFEVANTIVKGFTLMESLSTKNIKHLKEEVLTLEGIQDLVSKDMDELLRIVAADKRDELKVFSDEVIRFGNRSKDPQWHNLDRYFEKISRELNSQRQTKEEAELLMQHLMNLVQHTAELYHELHALDRFAQDYQHKRDEEDNPSAAHSGDSLSILKAELRSQKKHVKHLKKKSLWSRSLEEVMEKLVDIVHFLHLEINKSFGSEDGPKPFIQSKSNRQRLGPAGLSLHYANIVLQMDTLVARSGSMPANTRDTLYQSLPPNIKLTLRSKLPTFHVAEELTVANIKQEMEKTLHWLVPIATNTAKAHHGFGWVGEWASTGSDLNKKTTKTDVMRIETFHHADKEKVENYILELLLWLHRLAVKSKAGGDVGEVKSAIRSHVGTVLQKTTQQSTNAVSPLLTTDEQIMLKDVSNKIPVRGISKSKSLDFDRVKTALTDNSKLIKSNSYSTTSRNKEFSYNRICSKVPVIDFGIDKKRALDVIDRVNVAR 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05264 641 Pfam Domain of unknown function (DUF3475) 153 209 IPR021864 GO:0045927
Trre7g05264 641 Pfam Protein of unknown function (DUF668) 373 458 IPR007700 GO:0045927
Trre7g05264 641 Coils Coil 239 266 - -
Trre7g05264 641 Coils Coil 306 326 - -
Trre7g05264 641 MobiDBLite consensus disorder prediction 41 55 - -
Trre7g05264 641 PANTHER OS01G0873900 PROTEIN 1 638 IPR045021 GO:0045927
Trre7g05264 641 MobiDBLite consensus disorder prediction 15 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05264 Trre-Chr7 59008219 59013614 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05264 - - gmx:100804075 927.932
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05264 7 59008219 59013614 Trre7g05264 7 59008219 59013614 ECH
Trre7g05264 7 59008219 59013614 Trre5g04422 5 46239175 46246653 PCT