Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04422 ATGGATGAAAGTGCTACGAATTCCAAGATTCAATTATTCACAGTTTGGTTTTCTCAACTCTTTGGTGGTCTTTGTTCTAGGTCCTCTCAAGTTGACCGCGTCTTCGCCAACTCCGATGCCGATTCCAATCACTCCACCGCCGCTCCTCATAACAACACCACCGCTCATTTCACTTCACCGCCTCCGCTACGCCCTCAAACCATGGACAGAAATCCTCCCGGTCTCACCTCCGATGAACTTTTCTACGACGGAATTCCACGTTACGCCGCCAAGGTCTCTGAGGTGGGTTCGCGCCTGGGACGGGCTGGATTAGGGAAGGCGGTGGAGGTTTTGGACAATCTTGGGAGCAGCATGGCAAATTTAAATGCTGGCAGTGGGTTTGTTTCTGTAGCTGCAATGAAGGGGAGTGAAATTGCCATCTTAGCATTTGAGGTTGCAAACACTATTGTCAAAGGTTTTCATCTACTGCAATCTCTTTCCACAAAAAGTATTAAGCATCTAAAAGAAGAGGTGCTTCTTTCAGAGGCTGTGCTTGATTTAGTGTCAAAGGATAAGGATGAGCTTCTTAGGATTGTTGCCGCGGACAAAAGGCAGGAGTTAAAAGTTTTTTCTGACGAGGTGATTCGTTTTGGAAATCGTTCAAAGGATCCTCAGTGGCACAACTTAGACCGTTACTTTGAGAAGATTAGCAAAGAATCAAGTGCTCAAAGACTCTCAAGAGATGAGGCAGAATCAATAATGAAACAATTGATGAATTCGGTCCAATTTACAGCTGAGTTGTACCACGAACTTCATGCATTGGATAGATTTGAACAGGATATTGAGCATAAGGGTGAAGAGGAGGATCAAAGAGGTGATAACCTCGCATTCTTGAGAGCTGAAATTAAAAGTCAAAAGAAGCAAATTAAACATTTAAAGAAAAAATCACTCTGGTGTAGAAGTTTGGAGGAGGTTATTGAGAAGCTTGTAGACATTGTCCATTTTTTACATTTGGAGATAAGCAATAACTTTGGTAGTGCAGATAGCCAAAAACCAATAATTGGAGACATTGGCAACCACCAAAGGTTGGGCCCTGCAGGTCTTGCCTTGCATTATGCAAATATCGTGCTTCAAATTGATACCCTTGTGGCCAGATCTATTTCTATGCCTGCAAATACAAGGGATACATTGTATCAAAACTTGCCTCCTAATATAAAATTAACTTTACGTTCCAAGTTACCATCCTCTCATGTCATAGAAGAGCTCACTGTAGCAGATATAAAAGATGAGATGGAGAAAACATTACATTGGTTGGTTCCAATTGCCACAAACACATCCAAAGCACATCATGGTTTTGGCTGGGTAGGGGAGTGGGCAAACACAGGCTCTGAAGCGAATAAGAAAGTTTTCCCGGGTGGTGCAATGCGGATAGAAACATTCCACTATGCTGATAAAGACAAAGTAGAACATTATATTCTTGAACTTCTCTCATGGCTTCATCGCTTGGCCATCAAAAGCAAGGCTGGCAGTGATGCTGGCAAAGTTAAGTCTGCAATGAAGTCCTCTGCTGGCGTTACCACGGAAAAGACAAATAAGCAGTCTACAAACGCCGTTTTAACAATCGATGAGCAAAACATGCTGCAGGATGTAGGTAAGAAAACAAAAATAAAAGGAATCAGTAAAAGTTTGGACTTTGACAGTCTGAAGCCTACATTGAGTGAGAAGTGCAGACTGACCAAGACTAGCAGTCTTTCATCTATTAAAAGCAAGGAATTATCTTTTAATAGGATTTTGTCAAAATTTCCCGTGATTGATTTTGATATCGACAAAGAGCGAGCACTGAACGTGATTGATAGACTAGAAGTGGTCAGATAA 1854 0.4202 MDESATNSKIQLFTVWFSQLFGGLCSRSSQVDRVFANSDADSNHSTAAPHNNTTAHFTSPPPLRPQTMDRNPPGLTSDELFYDGIPRYAAKVSEVGSRLGRAGLGKAVEVLDNLGSSMANLNAGSGFVSVAAMKGSEIAILAFEVANTIVKGFHLLQSLSTKSIKHLKEEVLLSEAVLDLVSKDKDELLRIVAADKRQELKVFSDEVIRFGNRSKDPQWHNLDRYFEKISKESSAQRLSRDEAESIMKQLMNSVQFTAELYHELHALDRFEQDIEHKGEEEDQRGDNLAFLRAEIKSQKKQIKHLKKKSLWCRSLEEVIEKLVDIVHFLHLEISNNFGSADSQKPIIGDIGNHQRLGPAGLALHYANIVLQIDTLVARSISMPANTRDTLYQNLPPNIKLTLRSKLPSSHVIEELTVADIKDEMEKTLHWLVPIATNTSKAHHGFGWVGEWANTGSEANKKVFPGGAMRIETFHYADKDKVEHYILELLSWLHRLAIKSKAGSDAGKVKSAMKSSAGVTTEKTNKQSTNAVLTIDEQNMLQDVGKKTKIKGISKSLDFDSLKPTLSEKCRLTKTSSLSSIKSKELSFNRILSKFPVIDFDIDKERALNVIDRLEVVR 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04422 617 Coils Coil 288 308 - -
Trre5g04422 617 MobiDBLite consensus disorder prediction 40 61 - -
Trre5g04422 617 Pfam Domain of unknown function (DUF3475) 140 196 IPR021864 GO:0045927
Trre5g04422 617 Pfam Protein of unknown function (DUF668) 355 439 IPR007700 GO:0045927
Trre5g04422 617 PANTHER OS01G0873900 PROTEIN 64 614 IPR045021 GO:0045927
Trre5g04422 617 MobiDBLite consensus disorder prediction 40 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04422 Trre-Chr5 46239175 46246653 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04422 - - gmx:100779607 827.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05264 7 59008219 59013614 Trre5g04422 5 46239175 46246653 PCT