Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05263 ATGAGCTCCAACAATTTAACTGGCTTGGTGTTAGCAGTGATTTCTAGCATTTTCATTGGTTCCAGCTTCATCATCAAGAAAAAGGGTCTTCAACTTGCAAGAGTCAACGGCCCTTCTGCAAGTGTTGGTGGGTATGGTTATTTGCTTCAACCTCTCTGGTGGGTCGGAATGATTACCATGATTGTTGGAGAGATAGCGAATTTTGTAGCGTACATTTACGCGCCTGCTGTGCTTGTTACTCCATTAGGTGCTTTGAGTATTATTGTTAGTGCTGTCTTGGCACATTTCCTCTTGAAGGAAAAGCTACTGAAAATGGGCATGTTGGGGTGTCTTATATGCATTCTAGGATCCACTATTATCGTACTCCATGCACCGCAAGAGATGTCGCTTAGTTCTGTACAACAGATATGGAAATTAGCCATTCAACCTGCATTTCTCATGTACACAGCATCTGCAATTGCCATAACGTTGTTCTTGGTTTTGTATTGCGCGCCTCGTTATGGCCAAACTAATATTTTGGTTTATATCGGAATTTGCTCTATAATTGGGTCTTTGACCGTTATGAGTGTAAAAGCAATTGGCATTGCCATAAAACTTACATTAGAAGGTGCAAACCAGATTTTCTATTTTCAGACATGGATATTCACAATGGTTGCTATCACCTGTATCATTGTCCAACTTAATTACCTTAATATGGCATTGGATAACTTTAACACAGCAGTTGTTTCTCCAATCTATTATGCATTGTTCACAGCTTTTACAATATTAGCCAGTGCAATTATGTTTAAGGACTATTCTGGTCAAAGTATAGGCAGTGTTGTGTCAGAGCTATGCGGTTTCGTTACTATTTTATCTGGAACAATTTTATTGCATAGTACAAGAGAGCCAGATCCTCAAGACAATACAGATTTATACACACCATTGTCTCCAAGAGTATCATGGTATATTGGCAACAATGAATCCTGGAAACAAAAGGAGGAGGACGTGTCACCGTTTAACTTAATAGCAATTATACGACAAGATCATTTCAAGTAA 1035 0.3894 MSSNNLTGLVLAVISSIFIGSSFIIKKKGLQLARVNGPSASVGGYGYLLQPLWWVGMITMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFLLKEKLLKMGMLGCLICILGSTIIVLHAPQEMSLSSVQQIWKLAIQPAFLMYTASAIAITLFLVLYCAPRYGQTNILVYIGICSIIGSLTVMSVKAIGIAIKLTLEGANQIFYFQTWIFTMVAITCIIVQLNYLNMALDNFNTAVVSPIYYALFTAFTILASAIMFKDYSGQSIGSVVSELCGFVTILSGTILLHSTREPDPQDNTDLYTPLSPRVSWYIGNNESWKQKEEDVSPFNLIAIIRQDHFK 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05263 344 PANTHER UNCHARACTERIZED 5 299 IPR008521 GO:0015095|GO:0015693|GO:0016020
Trre7g05263 344 Pfam Magnesium transporter NIPA 4 295 IPR008521 GO:0015095|GO:0015693|GO:0016020
Trre7g05263 344 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05263 Trre-Chr7 58996062 58999133 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05263 K22733 - gmx:100799756 575.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05263 7 58996062 58999133 Trre5g04414 5 46199208 46202750 ECH
Trre7g05263 7 58996062 58999133 Trre7g05263 7 58996062 58999133 ECH
Trre7g05263 7 58996062 58999133 Trre5g04414 5 46199208 46202750 PCT