Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04414 ATGTATTCCAGCAATTTGATTGGCTTCATTTTGGCCGTTTTCTCCGGCGCTTTCATCGGCTCTAGTTTCATCATCAAGAAAAAAGGTCTTCAACGTGCCGGTCTTAACGGCACTCCTGCTAGTGTCGGAGGATATGGTTATCTTCTTCAACCTCTTTGGTGGATCGGAATGATTACCATGATTGTTGGAGAGATTGCGAATTTTGTAGCATACATTTATGCGCCGGCGGTGCTTGTTACGCCACTTGGTGCTTTGAGTATTATTGTTAGTGCTGTTTTGGCTCATTTCATGTTAGGTGAGAAGTTACAGAAAATGGGCATGCTGGGGTGTCTTTTATGCATTGTCGGATCCACTGAGATCGTGCTCCATGCACCCCAAGAAAAATCTATTAATTCTGTGCAAGAAATCTGGCTTTTGGCTGTTCAACCAGCATTTCTCTTGTACACAGCCTCGGCAATTGCTGTAGCATTCTTTTTGATTTTGTATTGTGCACCTCGCTATGGCCAAACTAATATTTTCATTTATGTTGGAATATGCTCCATAATTGGATCCTTGACTGTCATGAGTGTAAAAGCAATTGGCATTGCCATAAAACTTACACTAGATGGTGCAAACCAGTTTGTCTACTTTCAGACATGGATTTTTACAATGGTCGCCGTTTCCTGCATCATTACTAGTTTAAATTACCTTAATATGGCATTGGATACTTTCAATACAGCAGTCGTTTCTCCAATCTATTATGCCTTGTTCACATCTTTTACAATATTAGCCAGCGCAATTATGTTTAAGGACTATTCTGGACAAAGTATAAGCAGTATTGCATCAGAGCTATGTGGTTTCATCACTGTCTTATCTGGAACAACTGTATTGCACAGTACTAGAGTACCAGATTCTCCAATCAGTACAGATGTGTACAGTCCCTTGTCTCCAAAAGTATCATGGTATATCCAAGGCAATGGTGAATCTTGGAAACAAAAGGATGAAGATGGACCACCCCTTAATTTAATTACGGTTATCCAGCAAGACCATTTCAAGTGA 1038 0.4037 MYSSNLIGFILAVFSGAFIGSSFIIKKKGLQRAGLNGTPASVGGYGYLLQPLWWIGMITMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLGEKLQKMGMLGCLLCIVGSTEIVLHAPQEKSINSVQEIWLLAVQPAFLLYTASAIAVAFFLILYCAPRYGQTNIFIYVGICSIIGSLTVMSVKAIGIAIKLTLDGANQFVYFQTWIFTMVAVSCIITSLNYLNMALDTFNTAVVSPIYYALFTSFTILASAIMFKDYSGQSISSIASELCGFITVLSGTTVLHSTRVPDSPISTDVYSPLSPKVSWYIQGNGESWKQKDEDGPPLNLITVIQQDHFK 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04414 345 Pfam Magnesium transporter NIPA 5 294 IPR008521 GO:0015095|GO:0015693|GO:0016020
Trre5g04414 345 PANTHER UNCHARACTERIZED 4 295 IPR008521 GO:0015095|GO:0015693|GO:0016020
Trre5g04414 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04414 Trre-Chr5 46199208 46202750 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04414 K22733 - gmx:100783541 619.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05263 7 58996062 58999133 Trre5g04414 5 46199208 46202750 ECH
Trre5g04414 5 46199208 46202750 Trre5g04414 5 46199208 46202750 ECH
Trre7g05263 7 58996062 58999133 Trre5g04414 5 46199208 46202750 PCT