Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05202 ATGTCGAAAGGTCATATGCGGAGAATGCCGTCAAGAAGTGGCGCTGCGACGACGTTCTCGATGGAAGTATTCGATAACGAAGTCGTTCCTGCTTCACTTGCTTCCATTTCACCTATTCTCAGAGTCGCTAACGAGATCGAAACAGAGCGTCCTAGAGTTGCATACCTATGTAGGTTTTACGCATTTGAGAAAGCACACAGGTTGGATCAGAGTTCCACCGGACGTGGTGTTAGGCAGTTTAAGACGTTGTTGCTGCAACGATTGGAGAGGGACAATGCAACCAGTCTTGCCTCTCGGATTAAGAAAACAGATGCAAGGGAAATCCAGGCTTATTATCAAATATACCATCAACAATATGTCAGACCTCTTGACCAAGCTGATCAGGCAGACAGGACCCAGCTCAGTAAAGCTTACAGGACTGCTGGGGTGATCTTTGAAGTCCTTTGTGCCGTTAATAAGACTGAGAAGGTCGAAGAAAAAGCTCCTGAGATGTCCAAAAATAGACGGAGTCACGGAGATATATACACCTCTTACTCTGGATTCTGCTGGTGTGCTTCTCTGCCCATTATGCTATTTGAAGAGGTGTTTTTGAGTGACTAA 600 0.4567 MSKGHMRRMPSRSGAATTFSMEVFDNEVVPASLASISPILRVANEIETERPRVAYLCRFYAFEKAHRLDQSSTGRGVRQFKTLLLQRLERDNATSLASRIKKTDAREIQAYYQIYHQQYVRPLDQADQADRTQLSKAYRTAGVIFEVLCAVNKTEKVEEKAPEMSKNRRSHGDIYTSYSGFCWCASLPIMLFEEVFLSD 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05202 199 Gene3D - 20 170 IPR023175 -
Trre7g05202 199 FunFam callose synthase 3 21 174 - -
Trre7g05202 199 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VTA1 HOMOLOG 27 151 IPR044538 GO:0032511
Trre7g05202 199 Pfam Vta1 like 35 158 IPR039431 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05202 Trre-Chr7 58593959 58595399 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05202 12 179 Glycosyltransferase AT2G31960 57.895 6.03e-58 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05202 K11000 - gmx:100777985 275.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04318 5 45309258 45315606 Trre7g05202 7 58593959 58595399 PCT