Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05056 ATGGACTGTGATGGCTGTGAGATGAAGGTCAAGAAAGCCCTTTCTTCACTAAGTGGGGTAAAATCAGTGGAGATAAACCGTAAACAGCAGAAAGTGACAGTAACTGGGTTTGTGGAGCCAAACAAGGTGCTAAAGAAGGCTAAGTCAACAGGGAAGAGAGCTGAAATTTGGCCTTATGTGCCTTACAACTTGGTGGCTCAACCTTATGCTGTCTCTACTTATGACAAGAAAGCACCTCCTGGTTATGTGAGAAGAGTGGAGAATGCTCCAACCACTGGAACCATGACAAGATATGAAGACCCTTATGTCAACATGTTCAGTGATGAAAACCCAAATGCATGTTCTATCATGTAG 354 0.435 MDCDGCEMKVKKALSSLSGVKSVEINRKQQKVTVTGFVEPNKVLKKAKSTGKRAEIWPYVPYNLVAQPYAVSTYDKKAPPGYVRRVENAPTTGTMTRYEDPYVNMFSDENPNACSIM 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05056 117 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 1 115 IPR045181 GO:0046872
Trre7g05056 117 ProSiteProfiles Heavy-metal-associated domain profile. 1 55 IPR006121 GO:0046872
Trre7g05056 117 Pfam Heavy-metal-associated domain 1 52 IPR006121 GO:0046872
Trre7g05056 117 CDD HMA 1 55 IPR006121 GO:0046872
Trre7g05056 117 Gene3D - 1 56 - -
Trre7g05056 117 SUPERFAMILY HMA, heavy metal-associated domain 1 58 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05056 Trre-Chr7 57432832 57433283 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05056 - - fve:101300069 219.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05056 7 57432832 57433283 Trre7g05056 7 57432832 57433283 ECH
Trre7g05056 7 57432832 57433283 Trre5g03412 5 30884902 30885605 PCT