Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05050 ATGGCTAACATGTTGTATAAAACCACCACGTGCGGAATTTCTTTCCATGACCAATCTCTCTCCGCTAATTCCGCTTCTCGCCACGTCTCCAGATCCCTCTCTTACTTCTCAAACCATTCCCACAAGTCACTTGTTGGGGTGGAGCAGAATAGAAGCCGGAGATTAATTGTTAAGTCAAAAACTGATTTTGATGATTTGGGTATTGACATTTCATTGAGTCCACGTGTTAATGCTGTCAAGCCTTCAAGAACTGTCGCTATAACCGATCAAGCTACTGCTCTTGTTCAAGCTGGTGTTCCTGTTATTCGATTGGCAGCTGGTGAGCCTGATTTTGATACACCTGCTGTTATTGCTGAGGCTGGGATTAATGCAATTCGTGAAGGGCACACAAGGTATACACCTAATGCTGGAACCTTAGAATTGCGCCAGGCTATTTGTCATAAGCTTAAAGAGGAGAATGGAATTGATTATACTCCTGATCAAGTTGTTGTTAGTAATGGAGCTAAGCAGAGTATTGCTCAGGCAGTAATCGCAGTTTGTTCGCCAGGCGATGAGGTCATTGTTCCGGCTCCATTCTGGGTTAGCTACCCAGAAATCGCACGGTTGGCTGATGCAACACCTGTAATTCTTCCAACGTCGATATCTAATAATTTCCTTTTAGATCCCAAACTCCTTGAGTCAAAAATTACTGAAAGATCAAGAGTGCTTATTCTCTGTTCACCGTCTAACCCAACAGGATCTGTCTATCCTAAAGAATTACTTGAAAAGATAGCCGATATTGTAGCAAAGCACCCAAGGCTTCTGGTTATCTCTGATGAAATTTATGAACACATAATTTATGCACCAGCAACACATACAAGCTTTGCGTCTTTACCGGGAATGTGGGACAGAACTCTGACCGTGAATGGATTTTCTAAGGCGTTTGCGATGACTGGTTGGCGGCTTGGTTATATTGCTGGTCCGAAACATTTTATTACAGCATGCGGAAAGGTCCAGAGTCAGTTCACTTCAGGGGCCAGTAGTATATCTCAGAAAGCTGCAGTTGCTGCATTAGGACTAGGCTATGCTGGTGGAGAGACTGTCACTAACATGGTAGCACTTGTGCCGGGGAGTGCATTTGGAGACGATACTTGCATCCGTATCTCTTATGCAGCATCCCTTACTACCATACAGGCAGCTGTAGAGAGAATTAAGAAATCACTTATTTCTCTTACCTCTGCTGCACTTGTTTAG 1233 0.4371 MANMLYKTTTCGISFHDQSLSANSASRHVSRSLSYFSNHSHKSLVGVEQNRSRRLIVKSKTDFDDLGIDISLSPRVNAVKPSRTVAITDQATALVQAGVPVIRLAAGEPDFDTPAVIAEAGINAIREGHTRYTPNAGTLELRQAICHKLKEENGIDYTPDQVVVSNGAKQSIAQAVIAVCSPGDEVIVPAPFWVSYPEIARLADATPVILPTSISNNFLLDPKLLESKITERSRVLILCSPSNPTGSVYPKELLEKIADIVAKHPRLLVISDEIYEHIIYAPATHTSFASLPGMWDRTLTVNGFSKAFAMTGWRLGYIAGPKHFITACGKVQSQFTSGASSISQKAAVAALGLGYAGGETVTNMVALVPGSAFGDDTCIRISYAASLTTIQAAVERIKKSLISLTSAALV 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05050 410 SUPERFAMILY PLP-dependent transferases 72 400 IPR015424 -
Trre7g05050 410 FunFam Aspartate aminotransferase 131 353 - -
Trre7g05050 410 Gene3D Aspartate Aminotransferase, domain 1 363 400 IPR015422 GO:0003824
Trre7g05050 410 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 303 316 IPR004838 GO:0003824|GO:0009058|GO:0030170
Trre7g05050 410 Gene3D Aspartate Aminotransferase, domain 1 97 113 IPR015422 GO:0003824
Trre7g05050 410 Gene3D - 114 352 IPR015421 GO:0003824
Trre7g05050 410 CDD AAT_like 102 399 - -
Trre7g05050 410 Pfam Aminotransferase class I and II 100 351 IPR004839 GO:0009058|GO:0030170
Trre7g05050 410 PANTHER ASPARTATE AMINOTRANSFERASE 70 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05050 Trre-Chr7 57400978 57404082 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05050 K15849 - gmx:100776446 567.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05050 7 57400978 57404082 Trre7g05050 7 57400978 57404082 ECH
Trre7g05050 7 57400978 57404082 Trre5g02205 5 16608917 16610866 PCT