Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02205 ATGCCTTCTTCCAAATTCTTAGCCTTTTCTAATAATAATAATCATTTCCACACCAGCGTCATATCTTCCTCTTTCTCTAAAACTAAAACCCCCAAATTCTCTTCTTTCATTTCCGCCACCATGTCCACCGAGAAGAATCAAACTCATACCCATCCTTTGCAGGTTGCAAAGCGGTTAGAGAAGTTCAAAACAACAATTTTCACCCAAATGAGTATGCTTGCCATCAAACACGGAGCTATAAACCTTGGTCAGGGTTTTCCAAACTTTGATGGTCCGGATTTTGTAAAGGAAGCAGCAATTCAAGCAATCAAGGATGGGAATAATCAGTATGCCAGGGGTTATGGAGTTCCAGACCTCAACATTGCTATTGCCGAGAGGTTCAAGAAAGATACTGGACTAGTGGTAGATCCTGAAAAGGAAATTACTGTGACATCTGGCTGCACGGAAGCAATTGCTGCAACTGTGTTAGGGTTGATAAATCCTGGTGATGAGGTTATCGTGTTTGCTCCTTTTTATGATTCTTATGAAGCCACTTTATCCATGTCTGGTGCAAACGTCAAAGGCATCACTCTGCGACCTCCCGATTTTTCTCTTCCGATTGAAGAGTTGAAATCCACCATCTCGAAGAATACTCGTGCCATTCTTTTAAATACCCCTCATAATCCTACCGGAAAGATGTTCACTCGAGAGGAGCTCAATACCATTGCATCTCTTTGCATTGAGAATGATGTTCTAGTTTTCTCCGACGAAGTTTATGATAAGTTGGCATTTGATATGGAACACATTTCAATTGCTTCTTTGCCAGGAATGTTCGAGCGAACAGTGACAATGAACTCATTGGGGAAGACATTCTCCTTGACCGGATGGAAAATTGGTTGGGCCATAGCACCTCCACACTTAACATGGGGAGTGCGTCAAGCACATGCTTTCCTCACTTTTGCAACCTCAAATCCTATGCAGTGGGCTGCTGCAGTAGCTCTTAGAGCTCCGGATTCTTATTATAGTGAACTGAAGAGGGATTATATGGCAAAGAGAGCTATTTTGGTTGAAGGGTTGAAGGCTGTTGGCTTCAAGGTATTCCCATCTACTGGAACCTATTTTGTGGTTGTTGATCACACCCCTTTTGGACATGAAAATGATGTCGCATTCTGCGAATATCTAGTTAAGGAGGTGGGAGTGGTGGCAATTCCAACCAGTGTGTTTTACTTAAACCCAGAAGAAGGAAAGAATTTAGTCCGATTTACTTTCTGCAAGGATGAAGGAACTCTTAGGGCTGCTGTTGAGAGGATGAAAGAGAAGCTTAGAAAATGA 1311 0.4233 MPSSKFLAFSNNNNHFHTSVISSSFSKTKTPKFSSFISATMSTEKNQTHTHPLQVAKRLEKFKTTIFTQMSMLAIKHGAINLGQGFPNFDGPDFVKEAAIQAIKDGNNQYARGYGVPDLNIAIAERFKKDTGLVVDPEKEITVTSGCTEAIAATVLGLINPGDEVIVFAPFYDSYEATLSMSGANVKGITLRPPDFSLPIEELKSTISKNTRAILLNTPHNPTGKMFTREELNTIASLCIENDVLVFSDEVYDKLAFDMEHISIASLPGMFERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHAFLTFATSNPMQWAAAVALRAPDSYYSELKRDYMAKRAILVEGLKAVGFKVFPSTGTYFVVVDHTPFGHENDVAFCEYLVKEVGVVAIPTSVFYLNPEEGKNLVRFTFCKDEGTLRAAVERMKEKLRK 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02205 436 Gene3D - 92 330 IPR015421 GO:0003824
Trre5g02205 436 SUPERFAMILY PLP-dependent transferases 55 435 IPR015424 -
Trre5g02205 436 CDD AAT_like 80 432 - -
Trre5g02205 436 PANTHER FI04487P 54 435 - -
Trre5g02205 436 FunFam Aminotransferase, class I/classII 92 330 - -
Trre5g02205 436 Gene3D Aspartate Aminotransferase, domain 1 69 430 IPR015422 GO:0003824
Trre5g02205 436 Pfam Aminotransferase class I and II 80 429 IPR004839 GO:0009058|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02205 Trre-Chr5 16608917 16610866 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02205 K23977 - gmx:100818968 752.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02205 5 16608917 16610866 Trre5g02205 5 16608917 16610866 ECH
Trre7g05050 7 57400978 57404082 Trre5g02205 5 16608917 16610866 PCT