Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05046 ATGTTCATCGAGAATTTTAAGGTTGAGAGTCCTAATGTTAAGTACACAGAGACTGAAATTGAGTCCGTGTACAGTTACGAAACAACCGAACTTGTTCATCAGAAGAACACAAATGACACTTATCAGTGGGTTGTTAAGCCCAAAACTGTCAAATATGACTTTAAAACCCAAACCAATGTCCCTAAATTGGGGGTAATGCTTGTTGGGTGGGGTGGAAACAATGGTTCTACCCTCACTGGTGGTGTTATTGCAAACCGAGAGGGTATTTCATGGGCAACAAAGGACAATATTCAGCAAGCCAATTATTTTGGGTCACTGACCCAAGCATCAGCTATCAGAGTGGGGTCTTTCCAAGGGGAAGAAATCTATGCCCCATTCAAGAGCCTTCTTCCAATGGTAAACCCTGAGGACATAGTATGGGGAGGATGGGATATCAGTGACATGAACCTAGCTGATGCCATGGGCAGAGCTAGGGTGTTTGACATAGACCTACAGAAACAGTTGAGACCTTACATGGAATCCATGGTTCCACTCCCTGGAATCTATGATCCTGATTTCATTGCTGCTAATCAAGGAGATCGTGCTAACAACATCATTAAAGGAACAAAGAAAGAACAACTTCAACAAGTCATCAAAGACATTAAGGAGTTTAAGGAAGCTAACAAGGTTGACAAGGTTGTTGTACTTTGGACTGCAAACACTGAGAGGTACAGTAATATTGTTGTGGGACTAAATGACACTATGGAGAATCTCTTAGCTTCTGTGGACAAGAATGAATCTGAGATTTCTCCTTCAACCCTTTTTGCTTTGGCCTGTGTTCTTGAAAATGTTCCTTTCATCAATGGAAGCCCTCAAAACACCTTTGTCCCAGGGTTGATTGATTTGGCCATCAAAAGGAACAGTTTGATCGGCGGAGACGACTTCAAGAGTGGTCAGACAAAAATGAAATCTGTCCTGGTTGATTTCCTTGTGGGAGCTGGTATCAAACCAACATCAATAGTGAGTTACAACCATTTGGGAAACAATGATGGAATGAATCTCTCAGCACCACAAACCTTCCGCTCCAAGGAAATCTCGAAGAGCAATGTTGTTGATGATATGGTTAACAGCAATGCAATCCTCTATGGACCTGGTGAACATCCAGACCATGTTGTTGTTATTAAGTATGTGCCTTATGTGGGGGACAGCAAGAGAGCAATGGATGAGTACACTTCAGAGATATTTATGGGTGGAAAGAACACAATTGTGATGCATAACACATGTGAAGATTCACTTTTAGCTGCTCCAATTATCTTGGACTTGGTTCTTCTTGCTGAACTTAGCACTAGAATCCAGTTCAAATCTGAACAAGAGGACAAGTTTCACACATTCCACCCTGTTGCAACTATCCTCAGTTACCTCACTAAGGCTCCTCTTGTTCCACCAGGTACACCAGTGGTGAATGCATTGTCAAAGCAGAGAGCTATGCTGGAAAACATTCTGAGAGCTTGTGTTGGATTGGCCCCTGAGAACAACATGATCCTTGAATACAAGTGA 1536 0.4232 MFIENFKVESPNVKYTETEIESVYSYETTELVHQKNTNDTYQWVVKPKTVKYDFKTQTNVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDNIQQANYFGSLTQASAIRVGSFQGEEIYAPFKSLLPMVNPEDIVWGGWDISDMNLADAMGRARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQGDRANNIIKGTKKEQLQQVIKDIKEFKEANKVDKVVVLWTANTERYSNIVVGLNDTMENLLASVDKNESEISPSTLFALACVLENVPFINGSPQNTFVPGLIDLAIKRNSLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVNSNAILYGPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVMHNTCEDSLLAAPIILDLVLLAELSTRIQFKSEQEDKFHTFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05046 511 FunFam Inositol-3-phosphate synthase 1 1 357 - -
Trre7g05046 511 Pfam Myo-inositol-1-phosphate synthase 311 424 IPR013021 -
Trre7g05046 511 Gene3D - 383 511 - -
Trre7g05046 511 Gene3D - 1 356 - -
Trre7g05046 511 PIRSF Myoinositol-ppht_synth 51 511 IPR002587 GO:0004512|GO:0006021|GO:0008654
Trre7g05046 511 FunFam inositol-3-phosphate synthase 383 511 - -
Trre7g05046 511 Pfam Myo-inositol-1-phosphate synthase 63 495 IPR002587 GO:0004512|GO:0006021|GO:0008654
Trre7g05046 511 PANTHER MYO-INOSITOL-1 PHOSPHATE SYNTHASE 1 511 IPR002587 GO:0004512|GO:0006021|GO:0008654
Trre7g05046 511 FunFam Inositol 1-phosphate synthase 315 420 - -
Trre7g05046 511 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 511 IPR036291 -
Trre7g05046 511 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 310 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05046 Trre-Chr7 57368660 57372258 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05046 K01858 - gmx:100800820 959.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05046 7 57368660 57372258 Trre7g05046 7 57368660 57372258 ECH
Trre7g05046 7 57368660 57372258 Trre5g03405 5 30697406 30700710 PCT