Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03405 ATGTTTATCGAGAATTTCAAAGTTGAAAGTCCCAATGTCAAGTACACTGAAACTGAGATTCAGTCCGTGTACAATTATGAAACCACTGAACTTGTTCATGAAAACAGAAATGGCACTTATCAGTGGATTGTTAAACCTAAAACTGTTAAATATGAATTTAAAACTCATACCAAAGTTCCTAAATTGGGGGTAATGCTTGTTGGATGGGGTGGAAACAATGGTTCAACCCTCACTGGTGGTGTTATTGCTAATCGAGAGGGAATTTCATGGGCAACGAAAGATAATATTCAACAAGCTAATTACTTTGGATCCCTGACTCAAGCTTCAGCTATTCGTGTTGGATCTTTCCAAGGAGAGGAAATCCATGCTCCCTTCAAGAGCTTGCTTCCAATGGTCAACCCTGATGACATTGTTTTTGGGGGATGGGATATCAGTAACATGAACCTTGCTGATGCGATGGCCAGGGCCAGGGTTTTCGACATTGATTTGCAAAAGCAATTGAGGCCTTATATGGAATCCATGGTTCCACTTCCCGGTATTTATGATCCGGATTTTATTGCTGCCAATCAAGGAGAGCGTGCTAATAATGTTATCAAGGGTACAAAGAGAGAACAAATTAACCAAATCATCAAAGACATAAGGGAATTTAAGGAAGCTAACAAAGTGGACAGGGTTGTTGTCCTATGGACTGCTAACACAGAGAGGTACAGTAATTTGGTTGTTGGACTCAATGACACCACAGAGAACCTTTTTGCTGCTGTGGACAGAAATGAGTCTGAGATTTCTCCTTCCACCTTGTTTGGTATTGCTTGTGTTTTGGAAAATGTTCCTTTCATTAATGGAAGCCCACAGAACACCTTTGTCCCAGGGCTGATTGATCTTGCCATCAAGAACAACAGTTTGATTGGTGGTGACGACTTCAAGAGTGGTCAGACCAAAATGAAATCTGTTTTGGTCGATTTTCTTGTAGGAGCTGGTATCAAGCCAACATCAATAGTGAGTTACAATCATCTTGGAAACAATGATGGTATGAACCTCTCAGCACCGCAAACTTTCCGCTCCAAGGAAATTTCAAAGAGCAACGTTGTTGACGATATGGTCAACAGCAATGCCATCCTCTATAAGCCTGGCGAGCATCCAGACCACGTTGTAGTCATTAAGTATGTGCCTTATGTTGGTGACAGCAAAAGAGCCATGGATGAGTACACTTCAGAAATTTTCATGGGTGGAAAGAACACTATCGTGTTGCACAACACATGCGAAGATTCCCTTTTGGCTGCCCCTATTATCTTGGATTTGGTTCTTCTTGCTGAGCTTAGCACTAGAATTCAGTTCAAATCTGAAGCTGAGAACAAGTTTCACACATTCCACCCTGTTGCTACCATCCTCAGTTATCTGACCAAGGCTCCTTTGGTTCCACCGGGCACACCAGTGGTGAATGCATTGTCAAAGCAGCGAGCAATGCTCGAAAATATCATGAGGGCTTGTGTTGGATTGGCTCCAGAGAACAACATGATTCTCGAGTACAAGTGA 1533 0.422 MFIENFKVESPNVKYTETEIQSVYNYETTELVHENRNGTYQWIVKPKTVKYEFKTHTKVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDNIQQANYFGSLTQASAIRVGSFQGEEIHAPFKSLLPMVNPDDIVFGGWDISNMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQGERANNVIKGTKREQINQIIKDIREFKEANKVDRVVVLWTANTERYSNLVVGLNDTTENLFAAVDRNESEISPSTLFGIACVLENVPFINGSPQNTFVPGLIDLAIKNNSLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVNSNAILYKPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIILDLVLLAELSTRIQFKSEAENKFHTFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENIMRACVGLAPENNMILEYK 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03405 510 FunFam Inositol 1-phosphate synthase 314 419 - -
Trre5g03405 510 Pfam Myo-inositol-1-phosphate synthase 310 423 IPR013021 -
Trre5g03405 510 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 309 422 - -
Trre5g03405 510 FunFam inositol-3-phosphate synthase 382 510 - -
Trre5g03405 510 Gene3D - 375 510 - -
Trre5g03405 510 Gene3D - 1 356 - -
Trre5g03405 510 Pfam Myo-inositol-1-phosphate synthase 62 494 IPR002587 GO:0004512|GO:0006021|GO:0008654
Trre5g03405 510 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 510 IPR036291 -
Trre5g03405 510 PIRSF Myoinositol-ppht_synth 50 510 IPR002587 GO:0004512|GO:0006021|GO:0008654
Trre5g03405 510 PANTHER MYO-INOSITOL-1 PHOSPHATE SYNTHASE 1 510 IPR002587 GO:0004512|GO:0006021|GO:0008654
Trre5g03405 510 FunFam Inositol-3-phosphate synthase 1 1 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03405 Trre-Chr5 30697406 30700710 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03405 K01858 - gmx:100800820 970.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05046 7 57368660 57372258 Trre5g03405 5 30697406 30700710 PCT