Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04761 ATGGACACAATTAACTCTCAAAACGACGACGTTTTCTTCGACGCTTTTCACCAATGTCCTTTCCACCATTGCTCCTCCACCACCGACCATACCATGCCAGAATCTCCCCCCTCCTCTTCCGGTCACTCCGACCCAGACCCACCTTCATCCCCCATGCTCCGTCGCCGTTCAATTCGCCGCCGATCACCCGAAAACGAATTACCCGACATTGTTTCTGCAACGACAGAGAGTCAAAATCCTTCAATTGCGAAGGAAAATGAGAATTTTCCCGAGAAAGGTGAAGTTTTTTCTTCTTCTCAATCTCCGATTGTTGATACCGAAGAAGAGACAAATGATGAATCGACGTTAACTACAGCTACGCACGATGAACCATTCGGTGATTCAGCTGAATCAACGAGTGAATTCAGCGATTTACCTTCGAATTCGCTTGATTTTGTAACGGGATTGGTGATTAGGGCAATCATGTTTCAAATTAGGATTTTCTTTATGTTAATAAAGTCTCCAATTTTATTTATGTTTCATATTTGCATGTTTTTTGTAGACCCTTTTGGAACAATGGGAAAATGGAAAATTTTAGTTATTTGGATTTTGGGTAGGGTTTGGAGTTTTGTTTTAGGGTTCATTGGACCTTCAGCTTTGGGATGGTTGAATGAAAATAAATCATTTTGGAAAGTTGCATTTCGATGTGGATGGGGGATTTTGTGGTCAATTTATGTTTCTTGCATTTTGTTTGCACTTTTTGTTTCATCACTTGTGTTTAGTGGGTTTTTGGTGAAGGGTTTGGTTGAAAAGCCCTTTCAGATGAACCAAGTGTTGAATTTTGATTACACTAAGCAGAGTCCGGTTGCGTTTGTTCCTATAATATCGTGTCCTGGTGTTGGCGGTGAATATCGTTCCGATGAGAATGGCGGCATTGATGTTGATAGGTTGGCGAATAAAAGGGTTATCCCCTCTAAGCAAAAGGTGCATCTCACTGTTTCATTGCTAGTTCCGGAGTCAGGATACAATACTAAACTTGGTGTCTTTCAGATCAGGGTAGACTACTTATCTTCTAATGGTAAAACAATTGCAAGTTCGAGACAACCTTGCATGTTAAGATTCAGAAGTGAGCCTATCCGCCTAATCACGACTTTCCTCAAGATTGTTCCTCTTCTTACTGGTTATACATCGGAGACCCAGACTCTGGATGCCAAGATGGGTGATTTTGTTGAAGGGGATGTTCCTACTTCATGCTTAAAAGTAACCCTTGAGCAGCGAGCAGAATATCTACCTGGTGCTGGCATTCCTCAAATATATGATTCATCTATATTTGTTGAATCAGAACTTCCTTTAATCAAGAGGATTTTATGGTATTGGAAGTTGAGCTTATTTATATGGATTGCAATGATGGCATTTGTGATGGAGCTTCTCTTTGTTCTACTGTGTTGTTGGCCTATGATTATTCCAAGAACCAGAAAAAGGAACGGTTCTGCTAGCCGTACTAGTTCCCAAAACAATCTTCAGGCTCCAAGTTGA 1515 0.4099 MDTINSQNDDVFFDAFHQCPFHHCSSTTDHTMPESPPSSSGHSDPDPPSSPMLRRRSIRRRSPENELPDIVSATTESQNPSIAKENENFPEKGEVFSSSQSPIVDTEEETNDESTLTTATHDEPFGDSAESTSEFSDLPSNSLDFVTGLVIRAIMFQIRIFFMLIKSPILFMFHICMFFVDPFGTMGKWKILVIWILGRVWSFVLGFIGPSALGWLNENKSFWKVAFRCGWGILWSIYVSCILFALFVSSLVFSGFLVKGLVEKPFQMNQVLNFDYTKQSPVAFVPIISCPGVGGEYRSDENGGIDVDRLANKRVIPSKQKVHLTVSLLVPESGYNTKLGVFQIRVDYLSSNGKTIASSRQPCMLRFRSEPIRLITTFLKIVPLLTGYTSETQTLDAKMGDFVEGDVPTSCLKVTLEQRAEYLPGAGIPQIYDSSIFVESELPLIKRILWYWKLSLFIWIAMMAFVMELLFVLLCCWPMIIPRTRKRNGSASRTSSQNNLQAPS 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04761 504 MobiDBLite consensus disorder prediction 26 137 - -
Trre7g04761 504 Pfam Putative adipose-regulatory protein (Seipin) 245 464 IPR009617 GO:0019915
Trre7g04761 504 MobiDBLite consensus disorder prediction 117 137 - -
Trre7g04761 504 PANTHER BERNARDINELLI-SEIP CONGENITAL LIPODYSTROPHY 2 HOMOLOG BSCL2 PROTEIN 114 502 IPR009617 GO:0019915
Trre7g04761 504 MobiDBLite consensus disorder prediction 68 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04761 Trre-Chr7 55159140 55161360 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04761 K19365 - gmx:100813988 594.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g04761 7 55159140 55161360 Trre7g04761 7 55159140 55161360 ECH
Trre3g00679 3 4688766 4691042 Trre7g04761 7 55159140 55161360 ECH
Trre7g04761 7 55159140 55161360 Trre3g00679 3 4688766 4691042 PCT