Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04533 ATGCAGCAAGTAAACGAAAACAAAATGAGAAACCGTTACAATCTTGTTGGTGAAAAACGTTGGTCTGTAGTTCTATTAACATCTTTAGGAATAATCGGAGTATTCCTTTTCACAACAACAATACTCCAAACCTCAGACAACACCTTATTTTGTTCTCTCACCCGAACCAAACTCCAAACCACAAACCAAAACCAAAACACAAACCCAACACCGATCCAACTTCGTGCTATTCTTCACTACGCAACCTCACACGTTGTTCCACAACAATCCATCCACGAAATCACCGTCACGTTAGACGTCATCAAATCGTTAAATCGACCTTTCAACTTCCTTGTTTTTGGTTTGGGCCATGATTCACTTATGTGGGCCGGGTTTAACCCATTAGGTAAAACCATTTTTCTTGAAGAAGATCCGAAATGGGTTCAAACCGTTCTTAAAGACGCACCGGAGTTAAACGCTATAACCGTTAATTATCGGACTCAGCTTCAACAAGCCGATGAGCTTCTCAAAACTTATAGATCCGAACCGGATTGTTCTCCGGCGAAAGCAACGTTACGTGGAAACGAGAAATGTAAACTTGCTCTTCATAATCTTCCTGATGAGATTTATAATACCGAGTGGGATTTGATAATGATCGATGCGCCGAGAGGTTATTTTGATGAGGCGCCGGGGAGAATGGCGGCGATATTTTCGATGAATATTATGGCGAGGAATAGGAAAAGTTCTGGTGTGACGCATGTTTTTTTGCACGATGTGAATCGGAGGGTTGAGAAGGTTTTTGCTGAAGAGTTTCTTTGTAAGAAGAATTTGGTGAAAGGTGTTGGTAGATTATGGCACTTTGAAATTGCTTCTGTTGCTAATAACACAACCAGTGGTGGTGATGATTCTATTATTGGTTCTAGTTACTGTTAA 912 0.4079 MQQVNENKMRNRYNLVGEKRWSVVLLTSLGIIGVFLFTTTILQTSDNTLFCSLTRTKLQTTNQNQNTNPTPIQLRAILHYATSHVVPQQSIHEITVTLDVIKSLNRPFNFLVFGLGHDSLMWAGFNPLGKTIFLEEDPKWVQTVLKDAPELNAITVNYRTQLQQADELLKTYRSEPDCSPAKATLRGNEKCKLALHNLPDEIYNTEWDLIMIDAPRGYFDEAPGRMAAIFSMNIMARNRKSSGVTHVFLHDVNRRVEKVFAEEFLCKKNLVKGVGRLWHFEIASVANNTTSGGDDSIIGSSYC 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04533 303 Pfam Polysaccharide biosynthesis 93 280 - -
Trre7g04533 303 Gene3D Vaccinia Virus protein VP39 88 291 IPR029063 -
Trre7g04533 303 NCBIfam TIGR01627 domain 75 290 IPR006514 GO:0045492
Trre7g04533 303 PANTHER OS11G0490100 PROTEIN 13 284 IPR006514 GO:0045492
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04533 Trre-Chr7 53371385 53372296 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04533 - - pvu:PHAVU_002G173400g 384.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g04533 7 53371385 53372296 Trre7g04533 7 53371385 53372296 ECH
Trre5g03073 5 25737639 25738517 Trre7g04533 7 53371385 53372296 PCT