Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03073 ATGAAGAACCGCTATTATAATTACCCTCTCCAACAGAGAAAACTATTCATCGGATTAACAACAGTTGGATTAATAGTCGCTGCATTATTCATCGTCACCGCAATCACAACCTCCGACACATCATCATCACTAGTAAATTGTCCAATCTCTTCAGGGATCCAAACCCGAACCCGAACCCGATCAAACGACAATAACAACCCATCACCGATCCAACTCAGAGCAATTCTCCACTACGCCACATCACGTGTTGTTCCACAACAATCCGTCTCAGAGATCAAGATCAGTTTCGATGTATTGAAATCCTACGGTCGTCCTTGCAACTTTCTCGTCTTCGGTCTCGGCCATGATTCTCTCATGTGGGCTTCGTTTAATCCAGGTGGTAACACATTGTTTCTTGAAGAAGATCCTAAATGGGTTCAAACCGTTTTAAAAGATGCACCGGGTCTTCGAGCCCATACGGTTCGTTACCGGACACAGCTCCGTGAAGCTCATAAACTCATTACCTCGTACCGGTCTGAACCGTTGTGTTCTCCTTCTAAAGCTTTTTTACGTGGCAATGTAGCTTGTAAGCTTGCGCTTGAGAATTTACCTGATGAGGTTTATGATACGGAATGGGATCTTATTATGGTTGATGCGCCTAAAGGCTATTTCGCCGAGGCTCCGGGGAGAATGGCTGCCGTGTTTTCTGCTGCTGTTATGGCCAGGAATAGAAAGGGATCTGGTGTCACTAATGTTTTTTTGCATGATGTGGATCGTAAGGTGGAGAAGGTTTATGCTGAGGAGTTTCTTTGTAAGAAGAATTTGGTTAAAGGTGCTGGTAGGCTTTGGCATTTTCAGATTCCGCCGTCTAACGACACCGATGCTGCTCGTTTTTGTTAA 879 0.4471 MKNRYYNYPLQQRKLFIGLTTVGLIVAALFIVTAITTSDTSSSLVNCPISSGIQTRTRTRSNDNNNPSPIQLRAILHYATSRVVPQQSVSEIKISFDVLKSYGRPCNFLVFGLGHDSLMWASFNPGGNTLFLEEDPKWVQTVLKDAPGLRAHTVRYRTQLREAHKLITSYRSEPLCSPSKAFLRGNVACKLALENLPDEVYDTEWDLIMVDAPKGYFAEAPGRMAAVFSAAVMARNRKGSGVTNVFLHDVDRKVEKVYAEEFLCKKNLVKGAGRLWHFQIPPSNDTDAARFC 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03073 292 PANTHER OS11G0490100 PROTEIN 14 292 IPR006514 GO:0045492
Trre5g03073 292 NCBIfam TIGR01627 domain 73 292 IPR006514 GO:0045492
Trre5g03073 292 Pfam Polysaccharide biosynthesis 91 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03073 Trre-Chr5 25737639 25738517 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03073 - - gmx:100791951 457.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g03073 5 25737639 25738517 Trre7g04533 7 53371385 53372296 PCT