Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04532 ATGTGTTCATTTGGGAAGAGAAAACCCAAACAGACTATTTCATATGCAAAGAGGCAGAAGAAATGTTCTGAGAAACCAACAACAACGGATTATGATTTTTTTGAGTCTTTACCAGATGACATCGTTATTTCTATCTTCTGTAGGCTTAGTTCTACAGCAACTTCCCCTTCAGATTTTGTAACCGTTTTATTAACGTGTAAGAGATTAAAACGTTTAGCACTTCATAATCTGGTGTTATCAAAAGCTTCTCCAAGAACTTTCGCCATTAGAGCGAAAAATTGGTCTGATTCTGCACAACGATTTCTCAAAATCTGTGCCGAAGCAGGGAATGTTGAAGCATGTTATACTTTAGGCATGATTCGGTTTTACTGTTTGCAAAACAGAGGGAGCGGTGCTTCGCTTATGGCGAAAGCTGCAATGAATTCACACGCGCGTGCTCTTTACTCGCTTGCGGTTATACAGTTCAACGGCAGCGGCGGTACCAAAAGTGACAAAGACCTCCGCGCCGGAGTTGCTCTCTGCGCTAGAGCCGCTTTTCTCGGCCACATCGATGCGTTGCGTGAGCTTGGACACTGTTTACAAGACGGTTACGGTGTTAAACAGAATATCTCCGAGGGAAGGCGTTTTCTTATTCAGGCAAACGCACGTGAACTCGCCGCCGTGTTATCCACAAACGCCGCCGCGCGTCAGTTAGTTAACACAAATCTCCAATCACAGCTTCGATATGTTGCGGCGACTGGATGTCCGTTGTTGAGTGATTTTGGATGTAATGTTCCGGCGCCGGAGCCACATCCGGCGAGCCGGTTTTTGACGGAGTGGTTTACGGTTCGGAGCGGTTCTCTTGGTTCGGGATTGAGACTCTGTTCACATGTCGGATGTGGTAGACCGGAGACAAGGAAGCACGAGTTTCGAAGGTGTTCCGTTTGTGGTGCGGTGAATTATTGCTCACGCGCTTGTCAAGCGCTTGATTGGAAGTTTCGTCATAAGGCGGAGTGTGCTCCGGTGGAACGGTGGCTTGATGAGGATGGTGAAGACAACGGTGAAGATGACGGCGACCGTGAGGTAATGGTTATGGAGGATAGTTAG 1086 0.4733 MCSFGKRKPKQTISYAKRQKKCSEKPTTTDYDFFESLPDDIVISIFCRLSSTATSPSDFVTVLLTCKRLKRLALHNLVLSKASPRTFAIRAKNWSDSAQRFLKICAEAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAMNSHARALYSLAVIQFNGSGGTKSDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVKQNISEGRRFLIQANARELAAVLSTNAAARQLVNTNLQSQLRYVAATGCPLLSDFGCNVPAPEPHPASRFLTEWFTVRSGSLGSGLRLCSHVGCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKFRHKAECAPVERWLDEDGEDNGEDDGDREVMVMEDS 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04532 361 CDD F-box_SF 35 73 - -
Trre7g04532 361 Gene3D - 283 336 - -
Trre7g04532 361 MobiDBLite consensus disorder prediction 341 361 - -
Trre7g04532 361 Pfam MYND finger 293 332 IPR002893 -
Trre7g04532 361 SUPERFAMILY F-box domain 20 90 IPR036047 GO:0005515
Trre7g04532 361 PANTHER MYND DOMAIN-CONTAINING 12 349 IPR044508 -
Trre7g04532 361 Gene3D Tetratricopeptide repeat domain 82 243 IPR011990 GO:0005515
Trre7g04532 361 FunFam Predicted protein 280 337 - -
Trre7g04532 361 SUPERFAMILY HCP-like 95 213 - -
Trre7g04532 361 SUPERFAMILY HIT/MYND zinc finger-like 287 337 - -
Trre7g04532 361 ProSiteProfiles Zinc finger MYND-type profile. 290 332 IPR002893 -
Trre7g04532 361 MobiDBLite consensus disorder prediction 340 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04532 Trre-Chr7 53311060 53312336 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04532 - - gmx:100798174 565.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g04532 7 53311060 53312336 Trre7g04532 7 53311060 53312336 ECH
Trre5g03081 5 25894109 25895458 Trre7g04532 7 53311060 53312336 PCT