Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04520 ATGGATTGGGAAGGACAAAAGCTTGCAGAGCAGTTGATGCAGATAATGCTGCTTTCATTTGCTGTGATTGCATTTGGAGCTGGATATATCATGGCTTCTTTCCAAACAATGATCCTCACATACGCTGGTGGTGTGGTTCTCACCACATTGGTCACTCTTCCCAATTGGCCCTTCTTCAACCACCATCCTCTTAAGTGGTTGGACCCGAGCGAGGCAGAAAAGCATCCAAAGCCACAACCATCTGTCAATGTAACTGCAAAGAAGAAATCCATCAAAAAGTAG 282 0.4504 MDWEGQKLAEQLMQIMLLSFAVIAFGAGYIMASFQTMILTYAGGVVLTTLVTLPNWPFFNHHPLKWLDPSEAEKHPKPQPSVNVTAKKKSIKK 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04520 93 MobiDBLite consensus disorder prediction 69 93 - -
Trre7g04520 93 PANTHER MICROSOMAL SIGNAL PEPTIDASE 12 KDA SUBUNIT 1 89 IPR009542 GO:0005787|GO:0006465|GO:0016020
Trre7g04520 93 Pfam Microsomal signal peptidase 12 kDa subunit (SPC12) 1 70 IPR009542 GO:0005787|GO:0006465|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04520 Trre-Chr7 53191721 53192002 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04520 K12946 - gmx:100801319 167.162
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g03098 5 26145493 26149178 Trre7g04520 7 53191721 53192002 PCT