Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04015 ATGCTCACAGATGATAAGGAGGAGAGAAATCCACTAAAAATACCGACAAAATATAACATTCAAATGGCTTTAAGGTGGCTGATTGAGGGTAGCAAATCAGGAGACTCATTAGTGTTTCATTACTCAGGACATGGCACACAGGAAATGAACATGAATGAGATTGATCATAGATATGATAATGCAATTTGTCCTGTTGATTATGAGCAGAAAGGAAAGATTCTGAATGATGAGATCAATGCAACAATTGTTAGACCACTACCATTTGGTGCTAAACTTCATGCTATTATTGATGCATGTCATAGTGGGAATGTTCTTGATTTATCATTTGTGTGCAAGATGAACCGGGAAGGGTATTACACATGGGAGGATCATACAAATTCAAGAACTTATAAAGGTACAAAAGGAGGAATAGCAATTTGTATTTCAGCTTGTGATGATGATCAAGTCTCTGTAGACACATCTGCTTTAAGTGGAAAAGAAGTTACAGGTGCATTGACTTATAGTTTCATCCAAACAGTGCAAAATGAACCAGGATTAACTTATGGTCATTTGCTTAGTACCATGCGTTCTACCATTTATGGTACTAAAACAGGCATAGTTACTCTAAATGGTCCAATTGCTTCACTCTTAAATAAACTTCTTGGCCTACGGATCAAACAGGAAGCACAATTATCATCCTCGGAGTTGTTTGACATGTATAAAAAGCAGTTTATACTATGA 720 0.3639 MLTDDKEERNPLKIPTKYNIQMALRWLIEGSKSGDSLVFHYSGHGTQEMNMNEIDHRYDNAICPVDYEQKGKILNDEINATIVRPLPFGAKLHAIIDACHSGNVLDLSFVCKMNREGYYTWEDHTNSRTYKGTKGGIAICISACDDDQVSVDTSALSGKEVTGALTYSFIQTVQNEPGLTYGHLLSTMRSTIYGTKTGIVTLNGPIASLLNKLLGLRIKQEAQLSSSELFDMYKKQFIL 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04015 239 Gene3D - 1 239 - -
Trre7g04015 239 PANTHER METACASPASE-4 1 238 - -
Trre7g04015 239 Pfam Caspase domain 13 231 IPR011600 GO:0004197|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04015 Trre-Chr7 48467227 48468647 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04015 K22684 - gmx:100783197 388.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g04015 7 48467227 48468647 Trre7g04015 7 48467227 48468647 ECH
Trre7g04015 7 48467227 48468647 Trre3g00218 3 1466358 1468841 PCT