Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00218 ATGGGTGATAAATTGAAAGCCATAAAAAGCAAAGCCTATCATGTTCCGATTACCACAAACAGAACCAATGGTGCTAGCCTAGAATTAGATCACCATAATTTTCTTAGTTCAAATTGTACTATGGAAAAAGAACTTGCTTCCAGTGATTGCAAACCAAACTCAAAGTTTGTAGTACCAACAAAAACAACTACTGGCGGTGCTTGCTTTGATCACCATAAGTTTCTCAGTTCAAAGCATACTATGGAAAAAGAACTTGCCTGCAGTGGTTGCAAACGAAAGTTTGTAGTACCAACAAAAGTAACTGCATACTGTTGCCGTGAGTGCCAAGGTGTTAGCAAATCGATATCAGGTTATAAGCAATTAAGAGAAAACAGTTCAGGAGCCAAATTTTTCAACCAATATCAACTACACAATGCGGCCGGTTATTCCTCATCCTTGTTATCCACAGCTACGACTGGTAACAAGCGTGCAGTTCTCTGTGGAGTTAGTTACAGCAGAAGACAATATAGGCTCAAGGGAACCGTTAATGATGTTGTTAACATGAATTCTCTACTGGTTGAGAATTTTGGATTCCCAATTCAATCCATACATGTCCTCACAGAAGAACCGAAGGATCCAAATTTGATTCCAACAAAAAGGAATATAATGGAATCTTTGAAGTGGCTGGTGAAGGACTGCAAGTTAGGAGACTCATTGGTGTTCTACTTCTCTGGACATGGTACACAACAATATTACAAAGAAGATGAAAATTTCTTGCTTAAGGGAACTATTTTCCCTGTTGATTTTTTAAGAGAAGGAATGATCACTAACAATGAAATCAATTCTACTATTGTTGAGCCACTCAAGAATGGTGTTAAACTTCATGCTATTATCGATGCTTGTCATAGTGGAACAACTCTTGATCTCATGCATGTTTATAAAAAAGACAATGGCAATTGGAAATGGATAAATAACAATACCCCCAGCATAGAACCTGGTACTAAATGTACAAATGGTGGAGTAGCCATTTGTTTCAGTGCTTGTGAAGAAAGTCAGATGGCTGCTGATGCTGCAGTTTTTGGAGGAAAAGAGATGAATGGTGTTATGACCTATCTTTTAACAAAAATTATTAGAGAATATTCTGGAATTACATATAGCAGTTTGCTAGAAAAATTGCACGAGGATATTGGGAAGATTCAACAAAACAAACACTTCAATGGGTTCTTTAGACGTATTTTTTACAGTAGAATTGACCAGGACCCTCTTTTATCATCATCGAAGATATTTGACGTTAATACGCGCATATCATTTTGA 1293 0.3705 MGDKLKAIKSKAYHVPITTNRTNGASLELDHHNFLSSNCTMEKELASSDCKPNSKFVVPTKTTTGGACFDHHKFLSSKHTMEKELACSGCKRKFVVPTKVTAYCCRECQGVSKSISGYKQLRENSSGAKFFNQYQLHNAAGYSSSLLSTATTGNKRAVLCGVSYSRRQYRLKGTVNDVVNMNSLLVENFGFPIQSIHVLTEEPKDPNLIPTKRNIMESLKWLVKDCKLGDSLVFYFSGHGTQQYYKEDENFLLKGTIFPVDFLREGMITNNEINSTIVEPLKNGVKLHAIIDACHSGTTLDLMHVYKKDNGNWKWINNNTPSIEPGTKCTNGGVAICFSACEESQMAADAAVFGGKEMNGVMTYLLTKIIREYSGITYSSLLEKLHEDIGKIQQNKHFNGFFRRIFYSRIDQDPLLSSSKIFDVNTRISF 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00218 430 PANTHER METACASPASE-4 151 425 - -
Trre3g00218 430 Pfam Caspase domain 155 422 IPR011600 GO:0004197|GO:0006508
Trre3g00218 430 Gene3D - 95 430 - -
Trre3g00218 430 SUPERFAMILY Caspase-like 158 393 IPR029030 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00218 Trre-Chr3 1466358 1468841 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00218 K22684 - gmx:100795758 407.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g04015 7 48467227 48468647 Trre3g00218 3 1466358 1468841 PCT