Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03956 ATGGAGGAGCTGGAGAATGTGAGGGCTGAAGCAGTGCAAATGATGGGAGTGTTTCAAGTACTACCAAAGCTAGTAGTTTTCGATCTCGATTATACCATTTGGCCTTTCTACTGCGAGTGCCGCTCCAAGCACGACACCCCTTCTTTGTTTCCCCATTCCAGAGGCATCTTGACTGCACTCAAAGATCAAGGAATTCAAACTGCCATTGCTTCCAAATCACCAACTCCTCACATTGCAACCACATTTCTTGACAAACTCAATATCACCTCAATGTTTGCTGCCAAGGAAATATTTTACACCTCTACCCACAAAACAGAACATTTTCAGAAAATTTATTCAAGGACCGGGGTCTCCTACAATTCTATGCTCTTTTTCGATGACGATAACAATAACATACAAGAGATTACAAAATTGGGAGTAACGAGTATTTTGGTTAGGAATGGTGTAAATCTTGGAATATTTAGAGAAGGCCTCACAAGATTTTCACAAAACTTGGATGCATCAAAGAACAAGCAGAAAAGGCGCAAGTAA 531 0.4087 MEELENVRAEAVQMMGVFQVLPKLVVFDLDYTIWPFYCECRSKHDTPSLFPHSRGILTALKDQGIQTAIASKSPTPHIATTFLDKLNITSMFAAKEIFYTSTHKTEHFQKIYSRTGVSYNSMLFFDDDNNNIQEITKLGVTSILVRNGVNLGIFREGLTRFSQNLDASKNKQKRRK 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03956 176 Pfam Acid Phosphatase 21 163 IPR010036 GO:0016791
Trre7g03956 176 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 6 169 - -
Trre7g03956 176 SFLD C1.5.2: MDP Like 6 169 - -
Trre7g03956 176 SUPERFAMILY HAD-like 22 156 IPR036412 -
Trre7g03956 176 NCBIfam HAD-IIIC family phosphatase 23 137 IPR010033 -
Trre7g03956 176 PANTHER MAGNESIUM-DEPENDENT PHOSPHATASE 1 MDP1 1 170 IPR010036 GO:0016791
Trre7g03956 176 Gene3D - 6 166 IPR023214 -
Trre7g03956 176 FunFam Magnesium-dependent phosphatase 1 7 167 - -
Trre7g03956 176 CDD HAD_MDP-1_like 22 145 IPR035679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03956 Trre-Chr7 47809395 47810838 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03956 K17619 - gmx:100795199 276.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g03956 7 47809395 47810838 Trre7g03956 7 47809395 47810838 ECH
Trre7g03956 7 47809395 47810838 Trre3g00253 3 1661324 1662769 PCT