Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03902 ATGGAGAACAACAGAGACACTGAAACAGGACGTGTTAAGGAAGAAGAAGATGAAGAGTCACCAATTGAGGAAGTCCGGTTAACGGTAAACAGCACCGACGACTCAACACTTCCGGTATGGACATTCCGTATGTGGTTTCTCGGTCTTCTCTCATGTTGTCTCCTTTCCTTTCTCAACCAATTTTTCGCCTATCGATCAGAGCCACTCGTCATATCTCAAATCACGGTGCAAATAGCCACACTTCCACTCGGCCGTCTCATGGCAGCCGTGTTACCTTCAAAGACTTTCAAGATACCGGGGTTTGGGGCAAAACGGTTTTCGGTTAATCCAGGACCGTTTAACATGAAGGAGCATGTTCTTATTACTATATTTGCTAATGCAGGGTCTGCTTTTGGATCTGGTTCACCTTATGCTGTTGGTATTGTGAATATAATTAAGGCATTTTATGGAAGGAGTATATCATTTTTTGCTGCATGGCTTTTGATTATTACGACACAGGTTTTGGGATATGGATGGGCTGGTTTGCTTAGGAAGTATGTTGTTGAACCTGCTCATATGTGGTGGCCTAGCACCCTTGTCCAAGTCTCTCTGTTCAGAACTTTACACGAGAAAGATGATGATCAACACAAATTTTCAAGAGCAAAGTTTTTCTTCATAGCATTAATATGCAGTTTTACATGGTATATAGTCCCAGGATACTTATTCACAACACTTACAAGCATATCTTGGGTATGTTGGGTATTCTCCAAGTCAGTAACAGCTCAACAAATAGGTTCAGGCATGAATGGTTTAGGACTTGGTGCCCTTACACTTGATTGGTCTGCTGTTGCTTCATTCCTTTCCAGTCCTCTTATGTCGCCTTTCTTTGCCATTGCCAATGTCTTTGTTGGCTATACAATCGTTGTCTATGCTGCGATTCCTATAGCATATTGGGGATTCAATGTGTATGGTGCAAATAAGTTTCCTATTTTCTCATCTGATTTGTTCACATCACAAGGCCAACAATATAACATATCTGCTATTGTTAATGACACATTTGAGATTGATCTTGCTAAGTATCAACAACAAGGTCGAATTAATATGAGTATGTTTTTCGCGCTTAGTTATGGATTTGGATTCGCCACCATAGCTTCCACTATTACACATGTTGTTTGCTTCTATGGAAGGGAGATTATGGAGCGGTATCGTGCTTCGACAAAGGGCAAAGAAGATATCCATACAAAACTGATGAAAAATTATAAAGACATACCTTCTTGGTGGTTTTATTTGTTGCTAGGAGTAACACTTGTTGCTTCTTTCATGATGTGCATTTTTCTAAATGATCAGATTCAGATGCCTTGGTGGGGACTTGTCTTTGCTTCAGCATTGGCTTTTTTATTTACTCTTCCAATTAGCATCATAACTGCTACCACAAACCAGACGCCGGGGTTGAATATCATCACTGAGTATATCTTTGGTCTCATTTACCCTGGAAGACCAATTGCAAATGTATGCTTCAAAACTTACGGTTACATAAGCATGGCTCAGGCAGTTTCGTTCCTCAGCGATTTCAAACTTGGACACTACATGAAAATCCCTCCTAGGTCAATGTTCTTGGTGCAGTTCATCGGGACAGTGCTTGCCGGAACAATCAACATTGGTGTAGCATGGTGGTTGCTAGAATCTGTCAACAACATATGTAATAAAGATCTTCTCCCTGAAGGCAGTCCGTGGACATGTCCTAGCGACCGTGTTTTCTTCGATGCATCAGTTATTTGGGGTCTAGTAGGACCTACGAGGATCTTTGGTTCTCTTGGAGACTACTCGGCGATGAACTGGTTTTTCCTTGGAGGTGCCATAGGGCCAATACTAGTTTGGCTATTGCACAAGGCATTCCCAAAACAGTCATGGATCCCATTGATAAATCTTCCGGTACTCCTGGGAGCAACTGGAATGATGCCACCTGCATCAGCCATGAACTTCAATGCTTGGATTGTAGTCGGAACCATTTTCAACTTCTTTATCTTTCGTTACAGAAAGAAATGGTGGCAAAGATATAACTATGTTTTATCAGCAGCACTTGATGCCGGGGTGGCTTTTATGGCTGTACTGCTTTATTTTGCATTAGGATTGGAAAATGTAAGTCTCAATTGGTGGGGGACTGCTGGTGAGCATTGTCCTTTGGCTACTTGCCCAACAGCCAAGGGTATAGTGGTTGATGGTTGCCCTGTCTTTTGA 2217 0.419 MENNRDTETGRVKEEEDEESPIEEVRLTVNSTDDSTLPVWTFRMWFLGLLSCCLLSFLNQFFAYRSEPLVISQITVQIATLPLGRLMAAVLPSKTFKIPGFGAKRFSVNPGPFNMKEHVLITIFANAGSAFGSGSPYAVGIVNIIKAFYGRSISFFAAWLLIITTQVLGYGWAGLLRKYVVEPAHMWWPSTLVQVSLFRTLHEKDDDQHKFSRAKFFFIALICSFTWYIVPGYLFTTLTSISWVCWVFSKSVTAQQIGSGMNGLGLGALTLDWSAVASFLSSPLMSPFFAIANVFVGYTIVVYAAIPIAYWGFNVYGANKFPIFSSDLFTSQGQQYNISAIVNDTFEIDLAKYQQQGRINMSMFFALSYGFGFATIASTITHVVCFYGREIMERYRASTKGKEDIHTKLMKNYKDIPSWWFYLLLGVTLVASFMMCIFLNDQIQMPWWGLVFASALAFLFTLPISIITATTNQTPGLNIITEYIFGLIYPGRPIANVCFKTYGYISMAQAVSFLSDFKLGHYMKIPPRSMFLVQFIGTVLAGTINIGVAWWLLESVNNICNKDLLPEGSPWTCPSDRVFFDASVIWGLVGPTRIFGSLGDYSAMNWFFLGGAIGPILVWLLHKAFPKQSWIPLINLPVLLGATGMMPPASAMNFNAWIVVGTIFNFFIFRYRKKWWQRYNYVLSAALDAGVAFMAVLLYFALGLENVSLNWWGTAGEHCPLATCPTAKGIVVDGCPVF 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03902 738 PANTHER ISP4 LIKE PROTEIN 13 737 IPR004648 GO:0055085
Trre7g03902 738 NCBIfam OPT family oligopeptide transporter 23 704 IPR004813 GO:0035673
Trre7g03902 738 NCBIfam small oligopeptide transporter, OPT family 18 708 IPR004648 GO:0055085
Trre7g03902 738 MobiDBLite consensus disorder prediction 1 22 - -
Trre7g03902 738 Pfam OPT oligopeptide transporter protein 40 701 IPR004813 GO:0035673
Trre7g03902 738 MobiDBLite consensus disorder prediction 1 16 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03902 Trre-Chr7 47196325 47199878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03902 15 737 Organic Solute Cotransporters AT5G64410 79.115 0.0 1221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03902 - - gmx:100819886 1315.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g00275 3 1840779 1847148 Trre7g03902 7 47196325 47199878 PCT