Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03850 ATGGCGGTGGAGTACACATGCTGCGAATCGGAGTTCTTCGTTCACATATTGATAATCGTTCTGTTGGTTGTTTTCGCCGGATTAATGTCAGGTCTCACTTTAGGTCTCATGTCTCTCAGTCTTGTTGATCTTGAAGTTCTCGCTAAGTCCGGTACTCCTCACGATCGTAAATACGCCGAGAAGATATTGCCTGTTGTGAGAAATCAGCATTTATTGCTTTGTACCTTGCTAATTTGTAATGCCGCTGCCATGGAGGCACTTCCTATTTTTCTTGATAGCCTTGTTACTGCTTGGGGTGCTATCCTGATTTCGGTCACATTGATTCTTCTCTTTGGTGAGATTATACCCCAATCAGTTTGTTCTCGATATGGTTTAGCTATCGGTGCATCAGTGACTCCTTTTGTCCGTGTGCTTGTTTGGTTATGTTACCCAGTTGCTTTTCCAATTAGCAAGTTGTTGGACTATTTGCTGGGCCATCGACATGAAGCCCTTTTCCGCAGAGCTGAGTTGAAAACACTCGTAGATTTGCATGGCAATGAGGCTGGAAAAGGTGGGGAACTGACACATGATGAAACAACAATAATTGCTGGGGCACTTGAACTTAGTGAGAAGACAGCCGGTGATGCCATGACTCCTATATCTGAAACATTTGCCATTGATATTAATTCAAAGCTTGATAGGGGACTGATGAGTGAAATATTGGAGAAAGGGCATAGCAGAGTCCCAGTCTATTACGAGCAGCCCACAAATATTATTGGACTTATACTGATCAAGAATTTATTGACAATTCACCCAGAAGATGAAGCACCTGTAAAGAGTGTAACCATACGCAGGATACCAAGGGTTCAGGAAAGCATGCCACTTTATGACATTTTGAATGAGTTTCAGAAGGGACATAGTCACATGGCTGTTGTTGTAAGACAATGTGACAACACCAAGCAACCGTCTCCTGAAAATTATGCAAATGATTCGGTGAGAGATGTGAGGGTGGACATTGATGGTCAAAAGCCTCTCCAAGAGAAAGTCTTGAAACCCAAGATACCAATCCAAAAGTGGAAAAGCTTTCGAAATACAAACAAGTCAAATAGAGGCAGTTCTCGGAGCAGAAAATGGACAAAAAATATGTACTCGGATATCTTAGAGATAGATGGTAGTCCCCTTCCAAATATCCCTAAAGAAGAAGAAGCTGTTGGAATAATTACAATGGAAGATGTCATTGAAGAGCTTTTACAGGAGGAGATATTTGATGAAACAGATCATCATTTTGAAGACTCATGA 1278 0.4163 MAVEYTCCESEFFVHILIIVLLVVFAGLMSGLTLGLMSLSLVDLEVLAKSGTPHDRKYAEKILPVVRNQHLLLCTLLICNAAAMEALPIFLDSLVTAWGAILISVTLILLFGEIIPQSVCSRYGLAIGASVTPFVRVLVWLCYPVAFPISKLLDYLLGHRHEALFRRAELKTLVDLHGNEAGKGGELTHDETTIIAGALELSEKTAGDAMTPISETFAIDINSKLDRGLMSEILEKGHSRVPVYYEQPTNIIGLILIKNLLTIHPEDEAPVKSVTIRRIPRVQESMPLYDILNEFQKGHSHMAVVVRQCDNTKQPSPENYANDSVRDVRVDIDGQKPLQEKVLKPKIPIQKWKSFRNTNKSNRGSSRSRKWTKNMYSDILEIDGSPLPNIPKEEEAVGIITMEDVIEELLQEEIFDETDHHFEDS 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03850 425 FunFam DUF21 domain-containing protein 189 324 - -
Trre7g03850 425 Gene3D - 191 323 IPR046342 -
Trre7g03850 425 CDD CBS_pair_CorC_HlyC_assoc 205 306 IPR044751 -
Trre7g03850 425 Pfam Cyclin M transmembrane N-terminal domain 17 190 IPR002550 -
Trre7g03850 425 Gene3D - 382 417 IPR046342 -
Trre7g03850 425 ProSiteProfiles CNNM transmembrane domain profile. 8 191 IPR002550 -
Trre7g03850 425 PANTHER METAL TRANSPORTER CNNM 3 422 IPR045095 GO:0010960
Trre7g03850 425 SUPERFAMILY CBS-domain pair 194 411 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03850 Trre-Chr7 46798331 46804744 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03850 K16302 - gmx:100801937 713.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g03850 7 46798331 46804744 Trre7g03850 7 46798331 46804744 ECH
Trre7g03850 7 46798331 46804744 Trre3g00307 3 2015687 2018584 PCT