Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03641 ATGCAACGTTTGCCAGCCACCTTGTACCGTAAAATAGCCCGTCGACCATCATGCGACGTGTTCATAAATCATCGAGGAGTTGATACAAAGAGGAACTTCGCGGGGTTGCTCTACGATCGTTTGACGAAAATGGGAGTGAAATCATTTTTAGATAGCAAGAATATGAAACCTGGGGATAGGTTATTTGATCATATTGATAGAGGAATTCTTGGTTGCAAAGTTGGTGTAGCTGTTTTTTCTCCAACTTATTGTGACTCATATTTTTGTCTCCATGAACTTGCTCTAATGATGGAGTCCAAAAAGAGGGTTGTACCAATTTTCTATGATGTTAAGCCTTCTGAGCTTGTTGTTAAGGACAATGGTACTTGTCCTGTTAAAGAGCTTCAAAGGTTTAGTGCTGCATTAGAGGAAGCTAAATTCACTGTGGGATTAACCTTTGATTCTTCAAATAGGGACTGGTCGGTGTTGTTAAGAGATGCTTCAGAAGCAGTAATCATGAACTTGTTGGAGGTTGAGGAACATCGTAAGTTCATGAAGAGATTGAAGAAGAACTGA 555 0.4 MQRLPATLYRKIARRPSCDVFINHRGVDTKRNFAGLLYDRLTKMGVKSFLDSKNMKPGDRLFDHIDRGILGCKVGVAVFSPTYCDSYFCLHELALMMESKKRVVPIFYDVKPSELVVKDNGTCPVKELQRFSAALEEAKFTVGLTFDSSNRDWSVLLRDASEAVIMNLLEVEEHRKFMKRLKKN 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03641 184 SMART till_3 17 150 IPR000157 GO:0007165
Trre7g03641 184 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 137 IPR035897 -
Trre7g03641 184 Pfam TIR domain 19 122 IPR000157 GO:0007165
Trre7g03641 184 PANTHER COP1-INTERACTING PROTEIN-RELATED 15 181 - -
Trre7g03641 184 Gene3D - 13 178 IPR035897 -
Trre7g03641 184 ProSiteProfiles TIR domain profile. 16 164 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03641 Trre-Chr7 43762143 43763075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03641 12 147 Miscellaneous Gene Families AT1G57670 31.126 4.64e-16 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03641 - - tpra:123914671 357.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g03641 7 43762143 43763075 Trre3g00414 3 2783863 2784647 PCT