Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03546 ATGGACTCCAACAACAACAATAACATCAAATCTCCAAGAAACAACTTTCCTTCACCACGCCATAGCCACAGTTCAAGCAGTAGCAGCAGCAACAGTAACAACAACAACAACAACAACAACAATGTTCTTAACCCACCAAAACCCATAACCAGATCAGAACCCGGTAACCCATACCCGACAACATTTGTTCAAGCTGATCCATCTTCATTCAAACAAGTTGTTCAAATGTTAACTGGATCCACTGAAACATCATCAAAACATGTTTCCTCAAACAATTCCAATTCCAATTCCAATTCCAATTCCAACAATAACATTAGAAACCATATTCCACCAATCAAAACCATACCCAAAAAACAACAATCTGGTTTCAAACTCTACGAACGAAGAAACTCTCTTAAGAATCTTCATCTAAATCCATTACTCCCTGTTTTCTCCTCAAATTCAACAAACCCATCTGGTTTCTCTCCTAGAAATACTGAAATTTTGTCTCCAAGCATCCTTGATTTTCCCGCACTTGTTCTTAGTCCTGTTACTCCTCTTATACCCGACCCGTTTAACAGAACCACCACCGGTAATGGGAGTCCTAAACCAGTTTTGAACACTGAAGCTGAAGAAAAAGCTATAAGAGAAAAAGGGTTTTTCTTGCACCCTTCACCTTCAACTACTCCAAGAGACATTGAACCACCTCGTTTGCTTCCTCTGTTTCCAACAACTTCTCCAAAAGCTTCTTCGGGTCCTTCTTCATCGAGCACTTAA 756 0.3981 MDSNNNNNIKSPRNNFPSPRHSHSSSSSSSNSNNNNNNNNNVLNPPKPITRSEPGNPYPTTFVQADPSSFKQVVQMLTGSTETSSKHVSSNNSNSNSNSNSNNNIRNHIPPIKTIPKKQQSGFKLYERRNSLKNLHLNPLLPVFSSNSTNPSGFSPRNTEILSPSILDFPALVLSPVTPLIPDPFNRTTTGNGSPKPVLNTEAEEKAIREKGFFLHPSPSTTPRDIEPPRLLPLFPTTSPKASSGPSSSST 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03546 251 MobiDBLite consensus disorder prediction 54 109 - -
Trre7g03546 251 MobiDBLite consensus disorder prediction 1 47 - -
Trre7g03546 251 MobiDBLite consensus disorder prediction 211 251 - -
Trre7g03546 251 Pfam VQ motif 57 83 IPR008889 -
Trre7g03546 251 MobiDBLite consensus disorder prediction 237 251 - -
Trre7g03546 251 PANTHER VQ MOTIF-CONTAINING PROTEIN 11-LIKE 29 243 IPR039611 -
Trre7g03546 251 MobiDBLite consensus disorder prediction 1 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03546 Trre-Chr7 42096586 42097341 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03546 - - qsu:111992815 249.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g03546 7 42096586 42097341 Trre3g00475 3 3170834 3178744 PCT