Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00475 ATGGATTCTATGAGAAACCAAGAAGATAAAAAATCTTCACTTCCTTCACCAAATGTTCAATCTCAAAGCAATGGACAAATTCCATCACCAAGACCCATAACAAGATCCGAACCCGGTAACCCATATCCAACAACATTTGTTCAAGCTGATACAACCTCGTTCAAACAAGTAGTTCAAATGTTAACTGGATCCTCGGAAACATCAAAACAAGCTACAACAACAACAACAACAACAACCTTAAACAAATCAAATCATCACAACAACATTCCACCAATCAAATCTATTCCAACAAAACAACAAGGTTTCAAACTCTATGAAAGAAGAAACTCACTTCATAAGAATCTTAACATTAATCCTTTATCACCTACCACTATTTTCAACAATTCATCTTTTTCACCTCGTAACAAACAAGAGATCTTGTCTCCTAGTATTCTTGATTTTCCTTCTCTTGTTCTTAGTCCTGTTACTCCACTTATACCCGACCCGTTTAACCGATCCGCGTCAAATGGGTCAAGTGCTGGTGCTAGTAGAAGTGGTTGTTTGAATGCTGAAGCTGAAGATAAAGCGATTAAAGAAAAGGGATTTTTTTTGCATCCTTCACCAGTTTCAACTCCTAGAGACTCTGAACCACCACGTTTGCTTCCACTTTTTCCTACTACTTCTCCTAGAGCTTCTTCAGGAGACTAG 687 0.3785 MDSMRNQEDKKSSLPSPNVQSQSNGQIPSPRPITRSEPGNPYPTTFVQADTTSFKQVVQMLTGSSETSKQATTTTTTTTLNKSNHHNNIPPIKSIPTKQQGFKLYERRNSLHKNLNINPLSPTTIFNNSSFSPRNKQEILSPSILDFPSLVLSPVTPLIPDPFNRSASNGSSAGASRSGCLNAEAEDKAIKEKGFFLHPSPVSTPRDSEPPRLLPLFPTTSPRASSGD 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00475 228 MobiDBLite consensus disorder prediction 192 228 - -
Trre3g00475 228 MobiDBLite consensus disorder prediction 10 46 - -
Trre3g00475 228 Pfam VQ motif 41 67 IPR008889 -
Trre3g00475 228 MobiDBLite consensus disorder prediction 1 46 - -
Trre3g00475 228 PANTHER VQ MOTIF-CONTAINING PROTEIN 11-LIKE 17 225 IPR039611 -
Trre3g00475 228 MobiDBLite consensus disorder prediction 62 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00475 Trre-Chr3 3170834 3178744 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00475 - - mtr:11438828 297.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g00475 3 3170834 3178744 Trre3g00475 3 3170834 3178744 ECH
Trre7g03546 7 42096586 42097341 Trre3g00475 3 3170834 3178744 PCT