Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03112 ATGTCTAGTGCTAGGGTAGTTTTGACAATGTCATTGCTAGTAGTTACATTAGAACTTCTTAGTGTCCCACCTGTTGAGTCATGCCCTCCTTCTGAATGGGCAGCACTCATGTCTTTCAAAGCAGCTCTCAATGAACCTTATTTTGGAATCTTCCATTCATGGAGAGGCACCAATTGTTGTTACAATTGGTATGGTATCAGTTGCGACCCGACCACACGTCGAGTCACAGAGATCACCCTCCGCGGTCTCACTGTGGGGGACAACCACCGGCGCTATAGGCGAACCAAAACCATGGAAAGTGGATCCATGACTGGACACATATCCCCATCAATTTGCAACCTCAAACAACTCTCTAGCATTATCATCTCCGATTGGAAGGGCATTTCGGGAAATATCCCTGAATGCATCACAACCCTCGGTTTTATGCAAATCATAGATCTCTCTGGAAATCATATTTCTGGAAAGATTCCGTATCAAATAGGGCGCCTTACCCAACTTACAATGCTCAACCTTGCAGACAATCATATCTCTGGAAAGATTCCAAATACTATTATAGACCTCTTTAATTTAATGCAACTTGATCTTCGTAACAACGCTTTGGAGGGCCCCATTCCCGGGAACATTGGCAAACTCAGAAAGTTGAACCGGGCATTACTAAGTCACAATCGGATAAACGGTCGAATTCCGCGATCTTTTTCAAATATTTACGGGCTAGCAGACTTGGATATATCATTGAACAAGTTATCCGGTCCAATTCCGTTTTCATTGGGACAAATGTCGGTTCTGGACTCGCTGAACCTGAAGTATAACAACTTGACGGGGAGGATCCCGAAAACTTTGGTGGCATCGAGAATGAGCCATTTGGATTTGAGTAGAAATGCTTTGAGAGGACCTATACCGGATGTGTTTAGTGAAACCTCGTATTTCATAAACCTTGATTTGTCGTATAATCATTTGAATGGTTTGATTCCCAAGTCTATGGCATTAGCCTTGTACATTGGTCATGTGGACTTTAGTCACAACCGTCTCTTTGGGAGGATTCCGACCGTTCCTTCCCTTAGGCACCTTCTACAAGCATCGTTCGAACACAATCAACGCCTTTGCGGCAAACCACTTAAACCATGCACTGATGGTCATATACACAAACATGAATAA 1155 0.4355 MSSARVVLTMSLLVVTLELLSVPPVESCPPSEWAALMSFKAALNEPYFGIFHSWRGTNCCYNWYGISCDPTTRRVTEITLRGLTVGDNHRRYRRTKTMESGSMTGHISPSICNLKQLSSIIISDWKGISGNIPECITTLGFMQIIDLSGNHISGKIPYQIGRLTQLTMLNLADNHISGKIPNTIIDLFNLMQLDLRNNALEGPIPGNIGKLRKLNRALLSHNRINGRIPRSFSNIYGLADLDISLNKLSGPIPFSLGQMSVLDSLNLKYNNLTGRIPKTLVASRMSHLDLSRNALRGPIPDVFSETSYFINLDLSYNHLNGLIPKSMALALYIGHVDFSHNRLFGRIPTVPSLRHLLQASFEHNQRLCGKPLKPCTDGHIHKHE 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03112 384 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Trre7g03112 384 Gene3D Ribonuclease Inhibitor 30 197 IPR032675 -
Trre7g03112 384 Gene3D Ribonuclease Inhibitor 198 279 IPR032675 -
Trre7g03112 384 Pfam Leucine Rich Repeat 210 234 IPR001611 GO:0005515
Trre7g03112 384 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 7 123 - -
Trre7g03112 384 Pfam Leucine rich repeat 143 200 IPR001611 GO:0005515
Trre7g03112 384 Gene3D Ribonuclease Inhibitor 285 375 IPR032675 -
Trre7g03112 384 FunFam Leucine-rich repeat receptor protein kinase EMS1 132 230 - -
Trre7g03112 384 SUPERFAMILY L domain-like 27 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03112 Trre-Chr7 28795032 28796186 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03112 98 371 Receptor kinase-like Gene Family AT3G56370 32.188 7.32e-35 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03112 - - gmx:100778852 469.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g04488 11 57154539 57155651 Trre7g03112 7 28795032 28796186 PCT