Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03018 ATGAGCGATATTAAGGGAAGAAGTGGGTTTTGTGCGTTGCCGTTGCCAGATGCCAGACAAATTTGCTTTAGAAAAGGTATTCTTTATGGATTTTCGCGAGTTTTTTCTATACCATTGAAAACACTTCGTGGAGCAAGTCGGTCATTGAGGGTAGATCAATTTTGCAGTGTAGTGAATATTTCTTCATCATTAATGATTGAATTGGTTCCATGCCTAAGGGACAATTATGCATACCTTTTATATGATGTGGATACGGGGACTGTGGGTGTTGTTGATCCTTCTGAAGCTGCACCTGTCATAGATGCTTTAACCAAGAAAAATCTAAATTTGACATACATACTGAATACACACCACCATAATGATCACACCAATGGAAATGCTGAGTTGAAAGAAAGGTATGGGGCAAAGGTAATTGGTTCTGATTTAGACAAGGACAGAATTCCTGGTATTGATATCTATTTGAGTGATGGAGATAAGTGGATGTTTGCTGGTCATGAGGTGCATATAATGGCCACTCCTGGTGTCACCCGAGGCCATATAAGCTTCCACTTTCCTGGATCTGGTGCAATTTTTACAGGGGACACCTTGTTCAGCTTATCATGCGGGAAGATTTACGAAGGAACCCCGGAACAGATGCTATCTTCTCTTAAAAAGATCATGTCGTTGTCAGATGATACAAGTATCTATTGTGGTCATGAATATACATTGAATAATTCAAAGTTTGCATTGTCCATAGATCCTGAAAACAAGGAACTTCAATCTTATGCTTCACATGTAGCTCACCTTAGAAATAAAGGCTTGCCCACGGTTCCAACTACACTGAAGCTGGAAAAGGCTTGCAATCCATTCCTTCGCACCTGGAGCACAGAAATCCGGCAAAAACTAAAAGTTGCAGCCACGGCAGACGATGCAGAAGCCCTTGGTGTTATTCGACAAGCAGAGGATAAATTTTAG 954 0.4088 MSDIKGRSGFCALPLPDARQICFRKGILYGFSRVFSIPLKTLRGASRSLRVDQFCSVVNISSSLMIELVPCLRDNYAYLLYDVDTGTVGVVDPSEAAPVIDALTKKNLNLTYILNTHHHNDHTNGNAELKERYGAKVIGSDLDKDRIPGIDIYLSDGDKWMFAGHEVHIMATPGVTRGHISFHFPGSGAIFTGDTLFSLSCGKIYEGTPEQMLSSLKKIMSLSDDTSIYCGHEYTLNNSKFALSIDPENKELQSYASHVAHLRNKGLPTVPTTLKLEKACNPFLRTWSTEIRQKLKVAATADDAEALGVIRQAEDKF 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03018 317 FunFam Hydroxyacylglutathione hydrolase, mitochondrial 64 317 - -
Trre7g03018 317 Pfam Metallo-beta-lactamase superfamily 77 232 IPR001279 -
Trre7g03018 317 Gene3D - 64 317 IPR036866 -
Trre7g03018 317 Pfam Hydroxyacylglutathione hydrolase C-terminus 233 317 IPR032282 -
Trre7g03018 317 SUPERFAMILY Metallo-hydrolase/oxidoreductase 66 302 IPR036866 -
Trre7g03018 317 PANTHER BETA LACTAMASE DOMAIN 58 317 - -
Trre7g03018 317 PIRSF Glx 59 317 IPR017782 GO:0004416|GO:0019243
Trre7g03018 317 CDD hydroxyacylglutathione_hydrolase_MBL-fold 69 232 IPR035680 -
Trre7g03018 317 Hamap Hydroxyacylglutathione hydrolase [gloB]. 64 317 IPR017782 GO:0004416|GO:0019243
Trre7g03018 317 SMART Lactamase_B_5a 74 232 IPR001279 -
Trre7g03018 317 NCBIfam hydroxyacylglutathione hydrolase 67 317 IPR017782 GO:0004416|GO:0019243
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03018 Trre-Chr7 27397990 27401915 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03018 K01069 - gmx:100805615 540.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g04541 11 57528332 57530900 Trre7g03018 7 27397990 27401915 PCT