Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02198 ATGCCAGCCACAGAGTTCCAATCTCCGCTCCTATCGCCGGACGACGATGATTCCGTACCGGAGAAACAATGCATCGACGAGATGCTTCAGAATTACTGCGGCGAGTTTGGGCCATGGCAGCTAAAGCATTTCGTATTGACAAGTCTCGCATGGGCATTGGAAGCATTCCATACTATGATCATGATATTCGCTGACCGTGAACCGGAATGGAGGTGTCTCCAAGGTGTTGCCGGTTTGGGTTGCGATTCTGCGGCGAAGAGTGTGTGTAAACTTGAACCGGGTTCGTGGGAATGGGTCGGAGGTATCGGTTCTTCTACGGTAGCGGAATGGGGTTTGGTTTGTGGTGATAAGTTTAAGGTTGGGTTAGTTCAAGCCGTGTTTTTCGCCGGCTGTATGATCGGTGCTGGAATCTTTGGTCATCTCTCAGATTCATTTCTAGGAAGAAAAGGATCTCTCACAGTGGTCTGCATCCTAAACAGCATATTTGGCATCTTGACAGCATTCTCCCCAAACTACATCTCTTACTTCATCATCCGCTTCCTCACCGGATGCAGCACAGGCGGTGTTGGCCTTTGTGCTTTCGTCCTCGCCACAGAACCTGTGGGGCCCACAATGCGTGGCGCCGCTGGTATGTCAACCTTCTACTTCTTTTCCTCAGGCATAGCAGTTCTCTCAGGCATAGCATATATCTTCCCAACATGGCGCAAACTATACATTGCTTCCTCTTTTCCCTCTCTCTTATTCCTCATTTTCGTCCTCCCCTTCATCTCTGAGTCCCCTCGATGGTACCTAGTTCGAGGACGAATCAAAGAAGCCATGAAAACAATGTCCAACATAGCTAATTCTAATGGTAATCGCCTTCCACGCCAAGTTTATCTCACACTCGACGAAGAATCATCATCATCCTCATTCAATAACAGTACAGAGGACAAAGATGCGGTGTCAGGGTCTCTAGTGGACGTGATTCGTTCACCTGTAACACGATCGCGCTTGATTTTAGCAATAATAATCAACTTGTTGTGCTCAGTTGTGTACTACGGTCTAAGCCTAAATGTAGTAAACCTCGAAACAAATCTTTACCTTAACGTAATACTCAACGCAGTGGCGGAGATGCCAGCGTTCATGATAACAGCGATTTTGTTGGATAAGTTAGGGAGGAAGCCATTGACAATAGGGACATTATGGTTTAGTGGATTTTTTTGTTTTGTGGGGAGTTTGATGAAAAATAAAGGAGTGTGGAAAGGAGTGAAAATGGTGTGTGGAATTTTAGGAATATTTGGGATGGCAGGAACTTATAATTTGCTCTTTATTTATACATCAGAGTTGTTTCCAACAGTTGTTAGGAATGCTGCACTTGGTTGTGCTACACAAGCAGCACAAATGGGTGCAATATTGGCACCAGTTGTTGTCGTTTTGGGTGGTTCATTGCCGTTTGCTTTATTTTCTTTGTGTGGAATTGTTGCTGGGCTTTTTTCATTTTGGTTACCTGAGACACTAAACCAACCACTTTATGATACATTAACCGGAATGGAGGCAGGGCAAGATGTTAACTCTGCTAAGCCTAGTGTATGA 1572 0.4529 MPATEFQSPLLSPDDDDSVPEKQCIDEMLQNYCGEFGPWQLKHFVLTSLAWALEAFHTMIMIFADREPEWRCLQGVAGLGCDSAAKSVCKLEPGSWEWVGGIGSSTVAEWGLVCGDKFKVGLVQAVFFAGCMIGAGIFGHLSDSFLGRKGSLTVVCILNSIFGILTAFSPNYISYFIIRFLTGCSTGGVGLCAFVLATEPVGPTMRGAAGMSTFYFFSSGIAVLSGIAYIFPTWRKLYIASSFPSLLFLIFVLPFISESPRWYLVRGRIKEAMKTMSNIANSNGNRLPRQVYLTLDEESSSSSFNNSTEDKDAVSGSLVDVIRSPVTRSRLILAIIINLLCSVVYYGLSLNVVNLETNLYLNVILNAVAEMPAFMITAILLDKLGRKPLTIGTLWFSGFFCFVGSLMKNKGVWKGVKMVCGILGIFGMAGTYNLLFIYTSELFPTVVRNAALGCATQAAQMGAILAPVVVVLGGSLPFALFSLCGIVAGLFSFWLPETLNQPLYDTLTGMEAGQDVNSAKPSV 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02198 523 SUPERFAMILY MFS general substrate transporter 116 503 IPR036259 -
Trre7g02198 523 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 36 506 - -
Trre7g02198 523 ProSitePatterns Sugar transport proteins signature 1. 377 393 IPR005829 GO:0016020|GO:0022857|GO:0055085
Trre7g02198 523 ProSiteProfiles Major facilitator superfamily (MFS) profile. 43 500 IPR020846 GO:0022857
Trre7g02198 523 Pfam Sugar (and other) transporter 117 504 IPR005828 GO:0016020|GO:0022857|GO:0055085
Trre7g02198 523 Gene3D MFS general substrate transporter like domains 97 506 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02198 Trre-Chr7 17525011 17528058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02198 4 523 Organic Solute Cotransporters AT3G20660 67.238 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02198 K08202 - gmx:100805613 805.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g02198 7 17525011 17528058 Trre7g02198 7 17525011 17528058 ECH
Trre11g03552 11 48588601 48594144 Trre7g02198 7 17525011 17528058 PCT