Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01894 ATGACTCAGTATAAATACAACTGTAAAAGTTGCGGTCGTTGGTTGTGTGGGAAGTGTATTAGAGGTTGTGATCTGCCGAATCCGGTATCCGATGATAATAGTGGATTTAAGGAAACCATAAGTTCTTGTAAGTTTTGTTCGGTTTCTAATAGGACGTGTGAGGGTCAGCCGAGGAAGTGTATTGAAAAAGTGCATCCTGCTGTTTCTCCACAAGAGAGTCCTAGAGAAAGTCCTGAGCCGCCTTCACCGTGCTTTAGTGTCGAAACTGAAAGAGACGGTTCTGTACTAAATACCGAATCGAATCGTGGTAGTCACTTCGACCACTATTTTCGTGATCGAGAGTACGAGTATTATGCTCATTCAATGATCAGTAGGAGTTTGACCTCATCTGGTGCTCACCCTTCTTCGGTATCCACTTTTCCGTCCACCTTGAGGAGTGATGAAGAAGGGATAGAAGATTTCGGGAAGCACTCTCTCAGCCCATCTCGTACATATGGTGATAACAGTTCAGACGTAGATTCAAGTAGCGTTAGTGCTAGACATGACACTTACAACTATAATTCTGTGGGATCAAGTCCTTCCGACAGCCCTTCTAGGATTGATTTTGCTTCCAGGAGGGCCGGGCTTCCTATCCAGAAGAAGGGGCAGGAGAAAAGTTCCGTCCCTCAGAGTGATATTCCCTCTGGTCAACAAAGTATGGCTGTTTTAAGAAAGCCTGAATCTGCGACTGAGGATGCATATAACAGTACTTATTTTTCTGACGACTTGTCAATTTTCCGGAACCAGAATGAGAATTCACAGAGGTCATTGGATTTTGAAAACAACGGCCGTATTTGGTTCCCCCCACCACCTGAAGATAAAGATGCTGATGCAGAAGGCAATTTCTTTGCATATGACGACGAGGATGATGATATTGGTGACTCAGGTGCCTTGTTCTCATCCAATAGCAGTCTATCTAATATATTTCCTGCAAAAGAGAAACACAATGAAGGAAACAAGGAACCTTTAAAATCTGTAGTGCAAGGGCATTTTAGAGCTCTTGTTTCACAACTTTTGCAGGGAGAGGGAATTCAAGTTGGTAAAGAAAATGGTTCCGTCGACTGGGTAGACATCGTTGCAAATGTAGCATGGCAGGCTGCTAACTTTGTGAGACCAGACACTAGCAAAGGCGGCAGTATGGATCCAGGTGATTATGTAAAGGTCAAATGTGTAGCTTCTGGAAGCCCGAGTGACAGCACCCTTATCAAAGGAGTTGTTTGCACAAAAAATATAAAGCACAAGCGCATGTCCTCTCAATTCAAAAAACCTAGACTGCTACTCCTAGGAGGAGCATTGGAATATCAGAAAGTTCCAAATCAACTGGCTTCTTTTGATACATTGTTGCAGCAGGAAAAGGATCATCTGAAGGTGATCATTTCGAAAATTGAGGCTCTTCGACCGAATGTTTTGCTAGTAGAAAAAACTGTTGCTTCACAAGCCCAGGAATATTTGCTGGCAAAGGAAATCTCCTTGGTGTTGAATGTTAAAAGGCCTGTGCTTGAGCGTATAGCTCGCTGCACTGGTGCTCTTATCACTCCATCAGTGGATAATTTATCTAAAGCACGACTTGGGCACTGTGAATTGTTCCGGTTAGACCGGATTTTGGAAGATCACGAGGCTGGTAATCAGTTCAACAAAAAGCCATCAAAAACATTAATGTTCTTTGAAGGTTGTCCACGGCGTTTGGGATGCACGATCTTACTGAAGGGCACATGTCGTGAGGAACTAAAAACAATTAAAGCTGTTGTGCAATATGCAGTTTTTGCAGCCTATCATTTATCTCTTGAAACCTCATTCCTTGCTGATGAGGGTGCCACCCTGCCCAAGATGATAGTAAAACACTCGACAGACATGCCAGATAGTGCAACAGCTGACACTGACATTTCTATAGTATCAGACACCTTTTCTTCTACCATGTGCCAATCAGAGGCTGATGAGGCTTCTAGAGCGAAGGACTCTGTTGGTCATGATATTGGAAATCTGGGATCAGTGTCAGAGAATCTCAATGAACTTAACTTTCATTCATATACTGGCACCATGGTGGATTATAATGTTGAGAATGTGCTTTCTGATCCCGACTGTGATAACCTAACATCTAATTTGACTTTAGAATCTGATTATTTGCATAATGAATCAGAGGGGGACTCTATGTCTAGAGACCCTTCACGTGTCGATTTGCAAGAAACCATGCTTCATGAAGAGGGAGAGTGTGAAGCCTTTAACTCAACCAAAGACAAGATTAATGAGGATGAGTTTTCTGGTGAATACTTTTCTGCCACTGAAGCCCACCAGAGCATATTAGTGTACTTTTCCAGTCATTGTGTATCAAAAGGAACTGTATGTGAACGCACGAGGTTGTTGCGCATAAAGTTCTACGGCTCTTTTGATAAGCCACTCGGGAGATATCTCCATGATGATCTATTTGATCAGACATCTTGCTGTCAGTCTTGTAAAGAGCCTACGGAGACTCATGTCCTTTGTTTTACACACCAGCAAGGAAATCTTACGATCAATGTTAGGCGACTCCCCTCTGTGAAGTTACCAGGGGAAAGAGACGGCAAGATTTGGATGTGGCACCGATGTTTGAGGTGTCCACTTGTGGATGGAGTTCCACCAGCAACGGAGAGGGTTGTTATGTCTGATGCTGCGTGGGGATTGTCTTTTGGAAAGTTCTTGGAACTTAGCTTCTCAAACCATGCAACTGCTAATCGAGTTGCTACCTGCGGACATTCTTTGCAAAGGGACTGCCTCCGGTTTTATGGGTTTGGGAGCATGGTTGTTTTCTTCCGGTATTCCCCTATTGATGTTCTTTCTGTTCATCTGCCCCCATCTGTTCTGGAATTTGGCTACATCCAAGAAAAATGGATTAGAAAGGTGGCAGAAGAGCTTTTTAGTAAAGTGGAAACCTTGTATGTGGAGATATCATATGTGCTCGAACAATTGGAAACAAAGGTTTTGTCTCCTGGTATTGGAAATGAGCTGTTAGATGCCTATGACATTCATAACCACATACTGGATCTGAAAGACATGCTTTTAAGAGAAAAACTGGATTATCATAGTTTGCTAAAATCGGCCAGTGAGACTGTGGAGCCAGGAAATGTGGCTTTAGACATTCTGGAACTAAATCGTTTGAGACGTTCACTTCTAATTGGTTCACATGTTTGGGATCACCGGCTATGCTCACTGGACTCCCTTATTAAAAAAAATCTTAGTCCCATTAAACAAGAAAATGAATCATTTGCAGATGTTAAAGAATCAAGAGTTGATTCACTTCATAAGGATCAAAATTTTGACTCTGGGATTGAGCAAAATAATTACAGGCCTTCAAAATTGCACGAGTCTCATGAAAGTCATAAGCTTGTAGAGCCAGATGACCACCTTGAGTCGCGCGCTTCAGAAGCATCTGAGTGTTATCCTGATGGGGAAGAACCACATTCAGATGGTGAATTTGTTTCCAACAAAGCATTATCTGAGTGTATACCACCAAAGGAATCCAATCTTTCCGAAAAAATAGATTTGGCATGGACTGGAACTGTTCAACCTATTCATGCCTACGGTTCTGTTAAAACGTTGACACAACCGATGAGAGTTCAGTCTTTTGATTCAGCATTAAGAGTTCAGGACAGAATAAAAAAAGACTTGCCCTCATCTTTGCATATGTCAACACTTCGATCTTTTCATGCTTCTGGAGACTACAGGAATATGGTTAGAGATCCCATCTCCACTTCATTGTCAAATTACTTTCAAATGTTGCCGTGGGAGTCACAGAAGATAAATCTGATTCTGAGCTCCACGCCAACATTCATTTCCTCCATTTCTCACATTGCTGAAGGTGCTCGGTTGCTACTTCCCCAAACATGTCACGGCGATAGAGTTATAGCTGTATACGACAATGATTACTCCAGCATAATATCCTATGCCCTTAGTTCTAGAGATCACGAAGACTGGGTTTCTGGGAAGTCAGATCTGCATGATGGTAGCTGGAATGCTCTCCAGAGAAACAAAGAAGATTTAGTTTCTAACAGCTTTAATGCGTGGGCCACTTTGGACTTGGATTATATCAACTATGGTAGTTATGGATCTGATGAAGCTGCATCTTCAATTAGTTCTCTTATTCGGGAAAACAAAAAATCTCTACACTTGCAAATCTCTTTCGGTGACGATTCTTTGGGTGCTGGGGGTAAAGTGAATTTTTCTGTCACTTGCTATTTTGCGAAGCAGTTTGATTCACTCAGGAAAAAGTGCTGCCCTAATGAAGTTGATTTCGTGCGATCCTTGAGCTGTGGTCGGAGATGGAGTGCTCAGGGAGGGAAAAGTAATGTATATTTTGCCAAGTCATTAGATGAAAGGTTTATTATTAAACAAGTGACGAAGACCGAATTGGAATCCTTTGAAGAATTTGCACCTCAGTATTTTAATTACTTTATGGAAGCGTTAAACACGGGAGGCCCAACATGCCTTGCCAAAATTCTTGGTATTTATCAGGTCACTGTAAAACACCCAAAAGGTGGCAAGGAAACAAAGATAGATCTGATGGTAATGGAGAATCTGTTTTACAAGAGAAACATATCCAGGGTATATGATCTTAAAGGCTCAGAAAGATCTAGGTACAATGCAGATACAACTGGAACAAACAAAGTAATGCTAGACATGAATTTGCTAGAAACCTTGAGAACAAAACCCATATTTCTCGGAAGTAGGGCTAAGCGAAAACTTGAGAGAGCTGTATGGAACGACACATCCTTTTTGGCGTCAGTTGATGTTATGGATTACTCATTGCTGGTTGGGGTGGATGATGAGAAGAAGGAGCTGGTATTGGGGATAATTGATTACATGAGACAATACACATGGGACAAGCATTTAGAGACATGGGTTAAAGCTTCTGGAATACTTGGGGGTCCTAAAAATGCTGCTCCAACAATTGTTTCTCCTAAACAATACAAGAAAAGATTCAGGAAGGCCATGACTACCTACTTTCTCACCTTACCTGATCAATGGTCATCTTGA 5046 0.4197 MTQYKYNCKSCGRWLCGKCIRGCDLPNPVSDDNSGFKETISSCKFCSVSNRTCEGQPRKCIEKVHPAVSPQESPRESPEPPSPCFSVETERDGSVLNTESNRGSHFDHYFRDREYEYYAHSMISRSLTSSGAHPSSVSTFPSTLRSDEEGIEDFGKHSLSPSRTYGDNSSDVDSSSVSARHDTYNYNSVGSSPSDSPSRIDFASRRAGLPIQKKGQEKSSVPQSDIPSGQQSMAVLRKPESATEDAYNSTYFSDDLSIFRNQNENSQRSLDFENNGRIWFPPPPEDKDADAEGNFFAYDDEDDDIGDSGALFSSNSSLSNIFPAKEKHNEGNKEPLKSVVQGHFRALVSQLLQGEGIQVGKENGSVDWVDIVANVAWQAANFVRPDTSKGGSMDPGDYVKVKCVASGSPSDSTLIKGVVCTKNIKHKRMSSQFKKPRLLLLGGALEYQKVPNQLASFDTLLQQEKDHLKVIISKIEALRPNVLLVEKTVASQAQEYLLAKEISLVLNVKRPVLERIARCTGALITPSVDNLSKARLGHCELFRLDRILEDHEAGNQFNKKPSKTLMFFEGCPRRLGCTILLKGTCREELKTIKAVVQYAVFAAYHLSLETSFLADEGATLPKMIVKHSTDMPDSATADTDISIVSDTFSSTMCQSEADEASRAKDSVGHDIGNLGSVSENLNELNFHSYTGTMVDYNVENVLSDPDCDNLTSNLTLESDYLHNESEGDSMSRDPSRVDLQETMLHEEGECEAFNSTKDKINEDEFSGEYFSATEAHQSILVYFSSHCVSKGTVCERTRLLRIKFYGSFDKPLGRYLHDDLFDQTSCCQSCKEPTETHVLCFTHQQGNLTINVRRLPSVKLPGERDGKIWMWHRCLRCPLVDGVPPATERVVMSDAAWGLSFGKFLELSFSNHATANRVATCGHSLQRDCLRFYGFGSMVVFFRYSPIDVLSVHLPPSVLEFGYIQEKWIRKVAEELFSKVETLYVEISYVLEQLETKVLSPGIGNELLDAYDIHNHILDLKDMLLREKLDYHSLLKSASETVEPGNVALDILELNRLRRSLLIGSHVWDHRLCSLDSLIKKNLSPIKQENESFADVKESRVDSLHKDQNFDSGIEQNNYRPSKLHESHESHKLVEPDDHLESRASEASECYPDGEEPHSDGEFVSNKALSECIPPKESNLSEKIDLAWTGTVQPIHAYGSVKTLTQPMRVQSFDSALRVQDRIKKDLPSSLHMSTLRSFHASGDYRNMVRDPISTSLSNYFQMLPWESQKINLILSSTPTFISSISHIAEGARLLLPQTCHGDRVIAVYDNDYSSIISYALSSRDHEDWVSGKSDLHDGSWNALQRNKEDLVSNSFNAWATLDLDYINYGSYGSDEAASSISSLIRENKKSLHLQISFGDDSLGAGGKVNFSVTCYFAKQFDSLRKKCCPNEVDFVRSLSCGRRWSAQGGKSNVYFAKSLDERFIIKQVTKTELESFEEFAPQYFNYFMEALNTGGPTCLAKILGIYQVTVKHPKGGKETKIDLMVMENLFYKRNISRVYDLKGSERSRYNADTTGTNKVMLDMNLLETLRTKPIFLGSRAKRKLERAVWNDTSFLASVDVMDYSLLVGVDDEKKELVLGIIDYMRQYTWDKHLETWVKASGILGGPKNAAPTIVSPKQYKKRFRKAMTTYFLTLPDQWSS 1681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01894 1681 Gene3D GroEL 410 583 IPR027409 -
Trre7g01894 1681 MobiDBLite consensus disorder prediction 66 100 - -
Trre7g01894 1681 MobiDBLite consensus disorder prediction 126 241 - -
Trre7g01894 1681 MobiDBLite consensus disorder prediction 126 145 - -
Trre7g01894 1681 SUPERFAMILY SAICAR synthase-like 1404 1672 - -
Trre7g01894 1681 CDD PIPKc_PIKfyve 1409 1672 IPR044769 GO:0000285
Trre7g01894 1681 CDD Fab1_TCP 345 617 - -
Trre7g01894 1681 MobiDBLite consensus disorder prediction 161 199 - -
Trre7g01894 1681 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1448 1615 IPR002498 GO:0016307|GO:0046488
Trre7g01894 1681 MobiDBLite consensus disorder prediction 216 241 - -
Trre7g01894 1681 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 4 1680 - -
Trre7g01894 1681 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase isoform X1 410 583 - -
Trre7g01894 1681 Pfam TCP-1/cpn60 chaperonin family 367 614 IPR002423 GO:0005524
Trre7g01894 1681 MobiDBLite consensus disorder prediction 1121 1162 - -
Trre7g01894 1681 FunFam Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C 1359 1529 - -
Trre7g01894 1681 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1352 1672 IPR002498 GO:0016307|GO:0046488
Trre7g01894 1681 MobiDBLite consensus disorder prediction 1106 1162 - -
Trre7g01894 1681 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1375 1529 IPR027484 -
Trre7g01894 1681 Gene3D - 1530 1673 - -
Trre7g01894 1681 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase FAB1 1531 1673 - -
Trre7g01894 1681 SUPERFAMILY GroEL apical domain-like 411 583 IPR027409 -
Trre7g01894 1681 SMART PIPK_2 1384 1673 IPR002498 GO:0016307|GO:0046488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01894 Trre-Chr7 14806087 14813040 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01894 6 1681 Acyl Lipid Metabolism Gene Families AT1G71010 52.299 0.0 1642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01894 K00921 - gmx:100782480 2623.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g01894 7 14806087 14813040 Trre7g01894 7 14806087 14813040 ECH
Trre15g05076 15 60485881 60495445 Trre7g01894 7 14806087 14813040 PCT