Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01617 ATGCTAAACGATAAACGACATGTCGTTTTACTCTCTCTCACCACTCTTCTTCTCCTCTCTTCATTCTCTCTCACTCTCTGCGAAAAAGCCTCTAACAACGACGAAGATGAAGATCTCAGCTTCCTCGAAGAACCAGAAGACGCGTCAACAAAACACCATGACCACGGCAATTTTCCAGATCCCGATCAGTTCGAAGACGACGATGAAGACGGTGAAGATTTCGGCGACGGTGATTTCTCCGGCTTTGATCCTCACTCGGAGGAAGAGTTCAAGGAACCAGAAGTGGATGAGAAAGACGTTGTCGTTTTGAAGGAGCGAAATTTCACAACGGTAATTGAAAACAATAAATTCGTTATGGTTGAATTCTATGCTCCATGGTGTGGTCATTGTCAAGCTTTGGCGCCGGAGTATGCTGCCGCTGCAACTGAATTGAAGAACGATGGTGTTGTTTTGGCTAAGGTGGATGCTTCTCAGGAAACTGAATTGGCTCATGAGTATGATGTTCAGGGTTATCCTAGTGTTTTCTTCTTTATCGATGGAGTTCATAAACCTTACAATGGCCAAAGAACCAAAGATGGTATAGTGACATGGATTAAGAAGAAGATAGGACCTGGTGTATACAACATAACGACATTGGATGATGCTGAGCGCATATTGACTTCTGAAACTAAAGTCGTTTTGGGCTTCCTTGATTCTTTAGTTGGTGCTGAGAGTGATGAGCTAGCTGCAGCATCAAAACTTGAGGACGGCGTAAATTTTTACCAAACTGTGATTCCTAATGTGGCTAAGCTTTTCCATATTGACCCAAATGTCAAGCGCCCTGCTCTGGTCTTGCTCAAGAAAGAGGAGGAGAAACTGAACCATTTTGATGGCCAATTTGAAAAAACTGCAATAGCCAACTTTGTATCCTCCAACAAGCTTCCGTTGGTCTCAACTTTTACAAGGGAAAGTGCCCCGGTGATTTTTGAAAGTCCAATCAAGAAACAGTTGTTGCTGTTTGTGACTAAAAATGATACAGCAAAGTTTATTTCAGTATTTCAAGAAGCAGCGAAGTTTTTCAAGGGGAAGCTGGTCTTTGTTCATGTGGAAATGGATAATGAAGATGTTGGAAAGCCTGTTGCAGATTATTTTGGTATCTCTGGGAATACTCCCAAAGTACTTGCATTCACAGGAAATGATGATGGCAGAAAATTTTTGCTTGATGGAGAGGTGACCGTTGACAATATTAAGGCATTTGGAGAAGATTTCCTTGTAGACAAGCTAAAACCTTTCCTCAAGTCAGATCCAATTCCCGAAAGTAATGATGGTGATGTGAAAATAGTTGTTGGCAATAACTTCGACGAAATTGTATTGGATGAATCGAAGGATGTTCTACTTGAGGTTTATGCTCCCTGGTGTGGCCATTGCCAAGCCTTGGAACCAACATACAACAAGCTAGCAAAACATCTTCGTAGCATTGATTCTATTGTAATAGCCAAGATGGATGGAACAACAAATGAGCATCCTAGGGCAAAGTCTGATGGGTTCCCTACTCTCCTCTTCTACCCAGCAGGAAAAAAGAATTCTGACCCTATTACTGTTGACGCAGATCGCACAGTGGTGGCCTTTTATAAGTTCATCAAGAAACACGCATCAATCCCATTCCAACTTCAGAAACCAACCTCAACTTCTAAAACCGACGATAGTGGGAGTTCTGATGTCAAGGAGAGTCAAAGTAGCAGCACAGATGTGAAGGATGAATTATGA 1746 0.4215 MLNDKRHVVLLSLTTLLLLSSFSLTLCEKASNNDEDEDLSFLEEPEDASTKHHDHGNFPDPDQFEDDDEDGEDFGDGDFSGFDPHSEEEFKEPEVDEKDVVVLKERNFTTVIENNKFVMVEFYAPWCGHCQALAPEYAAAATELKNDGVVLAKVDASQETELAHEYDVQGYPSVFFFIDGVHKPYNGQRTKDGIVTWIKKKIGPGVYNITTLDDAERILTSETKVVLGFLDSLVGAESDELAAASKLEDGVNFYQTVIPNVAKLFHIDPNVKRPALVLLKKEEEKLNHFDGQFEKTAIANFVSSNKLPLVSTFTRESAPVIFESPIKKQLLLFVTKNDTAKFISVFQEAAKFFKGKLVFVHVEMDNEDVGKPVADYFGISGNTPKVLAFTGNDDGRKFLLDGEVTVDNIKAFGEDFLVDKLKPFLKSDPIPESNDGDVKIVVGNNFDEIVLDESKDVLLEVYAPWCGHCQALEPTYNKLAKHLRSIDSIVIAKMDGTTNEHPRAKSDGFPTLLFYPAGKKNSDPITVDADRTVVAFYKFIKKHASIPFQLQKPTSTSKTDDSGSSDVKESQSSSTDVKDEL 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01617 581 MobiDBLite consensus disorder prediction 33 96 - -
Trre7g01617 581 MobiDBLite consensus disorder prediction 61 77 - -
Trre7g01617 581 SUPERFAMILY Thioredoxin-like 434 545 IPR036249 -
Trre7g01617 581 SUPERFAMILY Thioredoxin-like 206 317 IPR036249 -
Trre7g01617 581 Gene3D Glutaredoxin 203 306 - -
Trre7g01617 581 PRINTS Thioredoxin family signature 118 126 - -
Trre7g01617 581 PRINTS Thioredoxin family signature 167 178 - -
Trre7g01617 581 PRINTS Thioredoxin family signature 126 135 - -
Trre7g01617 581 CDD PDI_a_family 101 198 - -
Trre7g01617 581 FunFam protein disulfide-isomerase A2 202 306 - -
Trre7g01617 581 CDD PDI_a_PDI_a'_C 438 540 - -
Trre7g01617 581 SUPERFAMILY Thioredoxin-like 93 203 IPR036249 -
Trre7g01617 581 ProSitePatterns Thioredoxin family active site. 458 476 IPR017937 -
Trre7g01617 581 MobiDBLite consensus disorder prediction 78 96 - -
Trre7g01617 581 Gene3D Glutaredoxin 432 546 - -
Trre7g01617 581 Pfam Thioredoxin-like domain 241 412 - -
Trre7g01617 581 Gene3D Glutaredoxin 307 431 - -
Trre7g01617 581 FunFam Protein disulfide-isomerase 89 201 - -
Trre7g01617 581 MobiDBLite consensus disorder prediction 44 60 - -
Trre7g01617 581 NCBIfam protein disulfide-isomerase 98 581 IPR005792 GO:0003756
Trre7g01617 581 SUPERFAMILY Thioredoxin-like 305 435 IPR036249 -
Trre7g01617 581 Gene3D Glutaredoxin 87 202 - -
Trre7g01617 581 CDD PDI_b'_family 317 417 - -
Trre7g01617 581 PANTHER PROTEIN DISULFIDE ISOMERASE 14 568 - -
Trre7g01617 581 ProSiteProfiles Thioredoxin domain profile. 416 545 IPR013766 -
Trre7g01617 581 FunFam Protein disulfide-isomerase 307 432 - -
Trre7g01617 581 ProSiteProfiles Thioredoxin domain profile. 81 203 IPR013766 -
Trre7g01617 581 MobiDBLite consensus disorder prediction 550 571 - -
Trre7g01617 581 MobiDBLite consensus disorder prediction 550 581 - -
Trre7g01617 581 Pfam Thioredoxin 100 200 IPR013766 -
Trre7g01617 581 Pfam Thioredoxin 438 523 IPR013766 -
Trre7g01617 581 NCBIfam protein disulfide-isomerase domain 104 201 IPR005788 GO:0003756
Trre7g01617 581 CDD PDI_b_family 206 305 - -
Trre7g01617 581 ProSitePatterns Thioredoxin family active site. 119 137 IPR017937 -
Trre7g01617 581 FunFam Protein disulfide-isomerase 433 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01617 Trre-Chr7 12366971 12371589 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01617 K09580 - gmx:100785630 876.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g04270 11 55279872 55283413 Trre7g01617 7 12366971 12371589 PCT