Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04270 ATGCGAATTCTCATTCTTCTTTCTCTCACAACACTTCTCATCTTCTCCTCTTTCTCTCCAATTCTCTCCAAAGAAGAAGAACTCGACGAAGATCTCAGCTTCCTCGACGAACCAGACTCCGATGAAACAATCTCCCATCACGATCACGACCACGATTCCGATCTCGAAGATGATTTCTCCGGATACGATCATCAAGAGTCTTATCAACCTCCTGAAATCGACGAAAAAGACGTCGTCGTTTTGAAGGATAATAATTTCACCGATGTAGTCAACAAAAACAGATTCGTTTTGGTTGAATTCTATGCACCGTGGTGTGGTCATTGTCAAGCTTTGGCTCCTGAATACGCCGCCGCCGCTACTGAATTGAAAACTGAGAATGTCGTTTTAGCCAAAATTGATGCCACTGAAGAAAGTGAAGTTTCTCAGAAATTTGATGTTCAGGGTTTTCCTACTATCCTTTTCTTCATTGATGGTGTTCACAAGACTTATTCTGGACAAAGAACAAAAGAAGCTATAGTGACATGGATTAAGAAGAAGACTGGACCGGGTATTCATAACATTACTTCATTGGAAGATGGTCAACGCATATTGACTTCTGAAACCAAAGTTGTTTTGGGTTTTCTCAATTCTTTAGTTGGTCCTGAGAGTGAGGAGCTTGCTGCGGCTTCACGACTTGAGGATGATGTTAACTTTTATCAGACTGTGGATCCTGAAGTGGCAAAGCTTTTCAATATTGATGTTAATGCCAAACGCCCCGCTTTGATCCTTGTCAAGAAAGAGGATGAAAAACTGAACCATTTTGATGGAAAATTCGATAAGTCTGCAATTGTAGACTTTGTCGCCTCCAACAAGATCCCTTTGGTAACAGTTTTTACAAGAGAAAGCGCTCCAACAATCTTTGAAAATCCAATCAAGAAACAGGTGTTGCTGTTTGTGACATCAAATGACACTGAGAAATTCCTCCCAGCATTTCAGGAAGCATCAAAGTCTTTCAAGGGAAAGTTGATCTTTGTGCTCGTGGAAACTGATAACGAAGATGTTGGAAAGTCTGTTTCAGAATACTTTGGTATTAGTGGGAGTGATCCAAAAGTGCTTGCATACACCGGAAATGAGGATGGGAGAAAATTCATTTTTGACGGAGAGGTGACTGTTGCCAAAATTAAGGCATTTGGGGAAGATTTCCTTGAAGACAAACTAAAACCCTTTTTCAAGTCAGACCCAGTTCCTGAAACTAATGATGGTGACGTGAAAATAGTTGTTGGGAATAATTTTGATGAAATTGTCTTGGATGAGTCAAAGGATGTTCTCCTCGAGATATATGCTCCCTGGTGCGGCCATTGCCAACATTTGGAACCAATATACAACAAGCTTGCAAAACATCTTCGTAGTATTGACTCTATTGTAATAGCCAAGATGGATGGAACACAAAATGAGCATCCCAGGGCAAAGGCTGATGGATTCCCCACTCTTCTCTTCTTCCCAGCAGGAAACAAAAGTTTTGATCCTATTACTGTTGAGACCGATCGTACAGTGGTAGCCTTTTATAAGTTCCTCAAGCAACATGCATCAATCCCATTCAAGCTCCAAAAACCAACTTCAACTCCTAAACCAGAGGGCTCTGATGTCAAGGAGAGTTCTGATGCCAAAGGAACCCAAAGTAGCAATAGTGATGTGAAGGATGAACTATGA 1689 0.4109 MRILILLSLTTLLIFSSFSPILSKEEELDEDLSFLDEPDSDETISHHDHDHDSDLEDDFSGYDHQESYQPPEIDEKDVVVLKDNNFTDVVNKNRFVLVEFYAPWCGHCQALAPEYAAAATELKTENVVLAKIDATEESEVSQKFDVQGFPTILFFIDGVHKTYSGQRTKEAIVTWIKKKTGPGIHNITSLEDGQRILTSETKVVLGFLNSLVGPESEELAAASRLEDDVNFYQTVDPEVAKLFNIDVNAKRPALILVKKEDEKLNHFDGKFDKSAIVDFVASNKIPLVTVFTRESAPTIFENPIKKQVLLFVTSNDTEKFLPAFQEASKSFKGKLIFVLVETDNEDVGKSVSEYFGISGSDPKVLAYTGNEDGRKFIFDGEVTVAKIKAFGEDFLEDKLKPFFKSDPVPETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQHLEPIYNKLAKHLRSIDSIVIAKMDGTQNEHPRAKADGFPTLLFFPAGNKSFDPITVETDRTVVAFYKFLKQHASIPFKLQKPTSTPKPEGSDVKESSDAKGTQSSNSDVKDEL 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04270 562 ProSiteProfiles Thioredoxin domain profile. 64 181 IPR013766 -
Trre11g04270 562 FunFam protein disulfide-isomerase A2 180 284 - -
Trre11g04270 562 MobiDBLite consensus disorder prediction 39 66 - -
Trre11g04270 562 CDD PDI_b_family 184 283 - -
Trre11g04270 562 MobiDBLite consensus disorder prediction 528 562 - -
Trre11g04270 562 SUPERFAMILY Thioredoxin-like 70 181 IPR036249 -
Trre11g04270 562 ProSitePatterns Thioredoxin family active site. 436 454 IPR017937 -
Trre11g04270 562 NCBIfam protein disulfide-isomerase 76 562 IPR005792 GO:0003756
Trre11g04270 562 SUPERFAMILY Thioredoxin-like 412 523 IPR036249 -
Trre11g04270 562 FunFam Protein disulfide-isomerase 67 179 - -
Trre11g04270 562 Pfam Thioredoxin-like domain 219 390 - -
Trre11g04270 562 CDD PDI_a_family 79 176 - -
Trre11g04270 562 Gene3D Glutaredoxin 411 524 - -
Trre11g04270 562 ProSiteProfiles Thioredoxin domain profile. 394 523 IPR013766 -
Trre11g04270 562 CDD PDI_a_PDI_a'_C 416 518 - -
Trre11g04270 562 FunFam Protein disulfide-isomerase 411 524 - -
Trre11g04270 562 PANTHER PROTEIN DISULFIDE ISOMERASE 11 559 - -
Trre11g04270 562 NCBIfam protein disulfide-isomerase domain 81 179 IPR005788 GO:0003756
Trre11g04270 562 MobiDBLite consensus disorder prediction 36 66 - -
Trre11g04270 562 CDD PDI_b'_family 295 395 - -
Trre11g04270 562 SUPERFAMILY Thioredoxin-like 283 413 IPR036249 -
Trre11g04270 562 Gene3D Glutaredoxin 181 281 - -
Trre11g04270 562 Pfam Thioredoxin 416 503 IPR013766 -
Trre11g04270 562 Pfam Thioredoxin 78 178 IPR013766 -
Trre11g04270 562 FunFam Protein disulfide-isomerase 285 410 - -
Trre11g04270 562 ProSitePatterns Thioredoxin family active site. 97 115 IPR017937 -
Trre11g04270 562 Gene3D Glutaredoxin 66 180 - -
Trre11g04270 562 SUPERFAMILY Thioredoxin-like 187 295 IPR036249 -
Trre11g04270 562 PRINTS Thioredoxin family signature 145 156 - -
Trre11g04270 562 PRINTS Thioredoxin family signature 96 104 - -
Trre11g04270 562 PRINTS Thioredoxin family signature 104 113 - -
Trre11g04270 562 Gene3D Glutaredoxin 282 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04270 Trre-Chr11 55279872 55283413 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04270 K09580 - gmx:100804924 848.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g04270 11 55279872 55283413 Trre11g04270 11 55279872 55283413 ECH
Trre11g04270 11 55279872 55283413 Trre7g01617 7 12366971 12371589 PCT