Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01610 ATGGAATCATCATCACAATCCAACGAACCAGAACCAGAACCAGAACCAGAACCAGTAGAAGAAGAAAGAGATATAGATATAAGAACTTCAACCGAACCCGGTTCAGATATCACCTGGATAAGAACCGCTTCAGACCAAGATATGGATCTCCCTTCTAGCCCTAGTAGTAGCGGTTACGCCGGTGAAGGAGGTGGTAGCACTAGTGCCACCACTGGTTCATTAATTGAGATCGAACACGATGAAATTGAAGAAGATGAAGAACAATTGAGGATTCAAAATCAAATCGATGAAATCTCAATTTCTGATTCCAATTCCTCTTGGATTCCTGGAAAACGACACCAAAATGAGGATGATGGTTCTATATCATGGAGAAAAAGGAAGAAGCATTTCTTTATTCTTAGCAATTCTGGAAAACCTATATATTCTAGGTATGGAGATGAACACAAACTTGCAGGGTTTTCAGCTACTTTGCAAGCAATTGTTTCCTTTGTTGAGAACGGGGGTGATTCTGTCAAATGGGTCAGGGCTGGAAAGCATCAGGTGGTTTTTCTTGTGAAAGGACCAATTTACTTGGTCTGCATTAGTTCCACAGAAGAACCTTATGAGTCGTTAAGGGGACAGTTGGAACTAATTTATGGGCAGATGCTTGTTATATTAACAAGATCAGTAAACAGATGTTTTGAGAAGAATCCGAAGTTTGATATGACACCCTTACTTGGTGGAACAGACGCCGTCTTCTCTTCTCTAATCCACTCTTTCAGTTGGAATCCAGCTACATTTCTTCATGCCTACACTTGCCTTCCTCTTTCTTATGCAACAAGGCAAGCTGCCGGTGCTGTCTTGCAAGACATTGCTGATTCTGGTGTTTTGTTTGCAACACTGATGTGCAGGCACAAGGTGATTAGTCTTGTTGGCGCTCAGAAAGCTTCCCTTCATCCAGATGATATGCTGCTGCTGGCCAACTTTGTTATGTCATCAGAATCGTTCAGGATGTCTGAATCATTTTCTCCAATTTGCTTGCCAAGATATAACCCTTCAGCATTTTTGTATGCTTATATCCACTATTTTGATGCCGACACATACTTGATGTTGCTAACCACTAATTCAGATGCATTTTATCATCTTAAGGATTGCCGGATTCGTATTGAAACGGTCCTTTTGAAGTCACATGTCCTTAGTGAAGTTCAGAGGTCCTTGCTAGATGGAGGAATGCATGTTGACGATTTACCACCAATACCTCAGTCTGGAGTATCTCATTTGGGCCAGCACATGCTTCCATCAGATTCTCCTGAAAGATTTAAGGAAGCTAATCCTGGCATTGGGGGTCCTGCTGGGTTGTGGCATTTCATATACCGCAGTATATACCTGGATCAATATGTCTCTTCAGAGTTTTCATCATCAATTAGTACTCGTCAGCAACAGAAAAGACTGTATAGAGCTTACCAGAAACTTTTTGCATCAATGCATGATAAAGGAATCGGACCACACAAAACTCAATTTAGAAGAGATGAAAACTATGTTCTTCTATGTTGGGTGACACAGGATTTTGAGCTTTATGCCGCCTTTGATCCCCTTGCTGACAAGGCCTTGGCAATAAAGACATGCAACCGTGTTTGTCAATGGATAAAAGATGTGGAAAATGAAATATTTTTGCTAGGAGCTAGCCCCTTTTCATGGTGA 1680 0.4131 MESSSQSNEPEPEPEPEPVEEERDIDIRTSTEPGSDITWIRTASDQDMDLPSSPSSSGYAGEGGGSTSATTGSLIEIEHDEIEEDEEQLRIQNQIDEISISDSNSSWIPGKRHQNEDDGSISWRKRKKHFFILSNSGKPIYSRYGDEHKLAGFSATLQAIVSFVENGGDSVKWVRAGKHQVVFLVKGPIYLVCISSTEEPYESLRGQLELIYGQMLVILTRSVNRCFEKNPKFDMTPLLGGTDAVFSSLIHSFSWNPATFLHAYTCLPLSYATRQAAGAVLQDIADSGVLFATLMCRHKVISLVGAQKASLHPDDMLLLANFVMSSESFRMSESFSPICLPRYNPSAFLYAYIHYFDADTYLMLLTTNSDAFYHLKDCRIRIETVLLKSHVLSEVQRSLLDGGMHVDDLPPIPQSGVSHLGQHMLPSDSPERFKEANPGIGGPAGLWHFIYRSIYLDQYVSSEFSSSISTRQQQKRLYRAYQKLFASMHDKGIGPHKTQFRRDENYVLLCWVTQDFELYAAFDPLADKALAIKTCNRVCQWIKDVENEIFLLGASPFSW 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01610 559 Pfam First Longin domain of FUZ, MON1 and HPS1 128 249 IPR043972 GO:0016192
Trre7g01610 559 PANTHER SAND PROTEIN-RELATED 10 557 IPR004353 GO:0006623
Trre7g01610 559 Pfam Third Longin domain of FUZ, MON1 and HPS1 445 546 IPR043970 GO:0016192
Trre7g01610 559 MobiDBLite consensus disorder prediction 1 70 - -
Trre7g01610 559 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 308 324 IPR004353 GO:0006623
Trre7g01610 559 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 524 537 IPR004353 GO:0006623
Trre7g01610 559 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 284 297 IPR004353 GO:0006623
Trre7g01610 559 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 361 387 IPR004353 GO:0006623
Trre7g01610 559 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 537 557 IPR004353 GO:0006623
Trre7g01610 559 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 128 145 IPR004353 GO:0006623
Trre7g01610 559 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 180 194 IPR004353 GO:0006623
Trre7g01610 559 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 333 356 IPR004353 GO:0006623
Trre7g01610 559 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 146 166 IPR004353 GO:0006623
Trre7g01610 559 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 231 243 IPR004353 GO:0006623
Trre7g01610 559 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 260 281 IPR004353 GO:0006623
Trre7g01610 559 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 508 522 IPR004353 GO:0006623
Trre7g01610 559 MobiDBLite consensus disorder prediction 31 70 - -
Trre7g01610 559 Pfam Second Longin domain of FUZ, MON1 and HPS1 289 380 IPR043971 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01610 Trre-Chr7 12296368 12300616 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01610 K20195 - mof:131149206 847.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g04275 11 55342703 55345537 Trre7g01610 7 12296368 12300616 PCT