Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04275 ATGCAGATGATTGTTATACTGACAAAGTCAGTAAACAGATGTTTTGAGAAGAATCCAAAGTTTGATATGACACCCTTGCTTGGTGGAACAGACACTGTCTTCTCTTCACTAATCCACTCTTTTAGTTGGAACCCAGCTACATTTCTTCATGCCTATACTTGTCTACCTCTTGCATATGCAACACGGCAAGCTGCTGGTGCCATCTTGCAAGACGTTGCTGATTCCGGTGTTCTGTTTGCAATACTGATGTGCAGACACAAGGTGATCAGTCTATTTGGTGCTCAGAAAGCCTCTCTTCATCCAGATGATATGCTGCTACTGGCCAACTTTGTTATGTCAACAGAGTCCTTTAGGACCTCAGAGGCATTTTCCCCTGTTTGCTTGCCAAGATACAATCCTTTAGCATTTTTGTATGCTTATGTCCATTATTTTGACGATGACACATACTTGTTGCTGCTTACAACCAATTCTGATGCATTTCACCATCTCAAGGATTGCAGGATTCGTATCGAATCGGTCCTTTTGAAGTCAAATGTCCTTAGTGAAGTTCAAAGATCCTTGTTTGAAGGCGGAATGCGTGTTGAGGAACTCCCACCCTTATCTCATTCTGGATCATCTCATTTGGGCCAGCATAGGCTTCAACCAGATTCTCCTGAAAGATTGCAAGAATCTAATTCTGGTGTTGGTGGTGTTGCTGGTATGTGGCATTTCATATATCGCAGCATATATCTAGATCAGTATGTATCTTCAGAGTTCTCATCACCTATTAACACTCCTCAGCAGCAGAAAAGATTATTTAGAGCATACCAGAAACTTTATGCATCCATGCATGAGAAAGGAATCGGGCCACACAAAACTCAGTTTAAGAGGGATGAAAACTATGTTCTGCTCTGCTGGGTAACACAGGACTTTGAACTTTATGCTGCATTTGATCCTCTTGCAGACAAGGCCTCCTCAATAAAGACGTGCAACCGGGTATGTCAATGGGTAAAAGATGTCGAAAATGAAATATTTTTGCTAGGAGGTAGCCCCTTTTCATGGTGA 1044 0.4195 MQMIVILTKSVNRCFEKNPKFDMTPLLGGTDTVFSSLIHSFSWNPATFLHAYTCLPLAYATRQAAGAILQDVADSGVLFAILMCRHKVISLFGAQKASLHPDDMLLLANFVMSTESFRTSEAFSPVCLPRYNPLAFLYAYVHYFDDDTYLLLLTTNSDAFHHLKDCRIRIESVLLKSNVLSEVQRSLFEGGMRVEELPPLSHSGSSHLGQHRLQPDSPERLQESNSGVGGVAGMWHFIYRSIYLDQYVSSEFSSPINTPQQQKRLFRAYQKLYASMHEKGIGPHKTQFKRDENYVLLCWVTQDFELYAAFDPLADKASSIKTCNRVCQWVKDVENEIFLLGGSPFSW 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04275 347 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 296 310 IPR004353 GO:0006623
Trre11g04275 347 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 121 144 IPR004353 GO:0006623
Trre11g04275 347 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 48 69 IPR004353 GO:0006623
Trre11g04275 347 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 149 175 IPR004353 GO:0006623
Trre11g04275 347 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 325 345 IPR004353 GO:0006623
Trre11g04275 347 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 96 112 IPR004353 GO:0006623
Trre11g04275 347 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 312 325 IPR004353 GO:0006623
Trre11g04275 347 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 19 31 IPR004353 GO:0006623
Trre11g04275 347 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 72 85 IPR004353 GO:0006623
Trre11g04275 347 PANTHER SAND PROTEIN-RELATED 1 345 IPR004353 GO:0006623
Trre11g04275 347 Pfam Second Longin domain of FUZ, MON1 and HPS1 77 168 IPR043971 GO:0016192
Trre11g04275 347 MobiDBLite consensus disorder prediction 199 225 - -
Trre11g04275 347 Pfam Third Longin domain of FUZ, MON1 and HPS1 234 333 IPR043970 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04275 Trre-Chr11 55342703 55345537 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04275 K20195 - gmx:100814534 614.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g04275 11 55342703 55345537 Trre11g04275 11 55342703 55345537 ECH
Trre11g04275 11 55342703 55345537 Trre7g01610 7 12296368 12300616 PCT