Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01593 ATGGTAGAGTGTGAGGAAAGAAAAGAGATGGAGGAGATGAAAGAATCAAGGTTTAAGAGGATTTGTGTTTTTTGTGGTAGTAGTCCAGGTAACAAGACTAGCTATAAGGATGCTGCTATTGAGCTTGGAAATGAGTTGGTTTCAAGAAATATTGATTTAGTGTATGGAGGAGGCAGCATTGGTTTGATGGGGTTAATTTCTCAAGCTGTTTATGATGGAGGTCGACATGTCATTGGGGTTATTCCAAGGACACTCATTGCAAGAGAGATAACTGGAGAGACAGTAGGAGAAATGAAGGCAGTAGCAGACATGCATCAAAGAAAAGCTGAGATGGCTAAGCATTCTGATGCTTTTATTGCCTTACCCGGTGGATATGGGACACTTGAGGAGCTTCTTGAGGTTATAACTTGGGCTCAACTTGGCATCCATGATAAACCAGTGGGGTTATTGAATGTAGATGGCTACTACAATTCTTTGTTATCTTTCATTGACAAAGCTGTGGAGGAAGGTTTCATTAGCTCCAAAGCTCGTCACATAATTGTATCTGCCCCATCAACAAAAGAGCTTGTCAAAAAGATGGAGGAATATTCCCCACAACATGAAAGAGTTGCATCTAAGCTAAGTTGGGAAAATGGGCAACTGGATTAG 648 0.4105 MVECEERKEMEEMKESRFKRICVFCGSSPGNKTSYKDAAIELGNELVSRNIDLVYGGGSIGLMGLISQAVYDGGRHVIGVIPRTLIAREITGETVGEMKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISSKARHIIVSAPSTKELVKKMEEYSPQHERVASKLSWENGQLD 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01593 215 Pfam Possible lysine decarboxylase 63 193 IPR031100 -
Trre7g01593 215 Gene3D - 7 195 - -
Trre7g01593 215 PANTHER LOG FAMILY PROTEIN YJL055W 12 214 - -
Trre7g01593 215 FunFam CASP-like protein 8 195 - -
Trre7g01593 215 SUPERFAMILY MCP/YpsA-like 18 196 - -
Trre7g01593 215 NCBIfam Rossman fold protein, TIGR00730 family 19 196 IPR005269 GO:0009691|GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01593 Trre-Chr7 12101862 12108517 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01593 K22522 - gmx:100815735 369.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g04300 11 55543339 55547627 Trre7g01593 7 12101862 12108517 PCT