Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01588 ATGATTCCAACTCGTTCTTCATCTCAGAATCATAACAAGAAGATCAAAACAACAACAACAACGCCTAGTCCTTTGCGGAGATCTGAGAGAAATCGGAACGTTTCATCTTCTTCTACATCTATCAATAATCATTCACCTGTTACTTCTAGAACTCCTGTTTCTAAGAGACACGTGTCGCCTAAAGAGAAGAAGAATCGTGATGAAGAAAAGGATAAGGAAAAGGAAATTTCGCTGAATCGGAAAGTTAAGAAAATGGATGCTCGTGTTTATCGAAGAATTTTAACTCGAAAGAAAGCTAAAGATTGCCAAAAGGAGACAAATAATGAGGATGAGAATAGGTCGACTGCAGAAGATAGCAAAGTGGGTGGTGACAAGACTGATGAGGAGTTGAAGGAGACTAGTTTACAATGTAAAGAAGTTTTTGAGGATTGTAATCTTCCAGCTGAAGATGCCAAAGCAACAGATATGAGTGCGGAGTCTAGGTCGAGTGGGTCTGTGAAAGAATTATCAGAAAATAATAATGGGACTATAGGATCAACGGTGGTACCATCTAATTCCAGTACTCACGAGACTAGTGGGATACCGGAAAAAGTTGAAGAGGAGACATCTCAAATGTTAGTAACTAGGGGTTCAGATTCAAATGAAAGTTTGATCAGGAAATGTGTTGGAAATGATAAGGATGGAAGTTTAACACCTTGTAAAAGAAAAAGCACACTGGTGGATATGTGTTCTGATGTTTCTGCTACATTGGTCGATGATGGCAACTGCAACTTAATTTTGGATGCTGACTCTGAAAGGCTTCACTGCAATGTTGTAGAGACCAATAGGCCTTCCAAAAGGATAAGGGGGATGAATAATGTTGACCTACCTGCTTCAAAGTCTAATGATGAAAAGTCAAGTACCAGAAACAAAGAAGGAAAATCAGGAGATTCAGCGGAGAAACCTCAAGGGAACAATGTTGAAACTGAGAAAATAAGGAAACAGCAGAGAAGCTTACATCTTTCACTGAAGCCGGAGATAGCAAAGCTTTGTGAAATTCTTCTTCTCCCAGATAGTGTCAAGAGTATGGTTGGAAAATTTCTTGAATATACCATGAACAATTACAAGATCTGTACAGAACCAGTATCAATATTACAAGCTTTTCAATTATCTCTGTGTTGCACTGCTGCTTCTTTGCTAAGGCACAAATTTGACACTGCAGATTCCCTCATTCTTGCAAAGCAGCACTTGAGTTTTGACTGTAAGAAAGACGCGGTTGATGAAATTAATGCAATGCTGTGGGATCTGAAGGACAATTTTTTATTACTCACAGAAAACACTAATGTCAATTGCTCTCCAAAGGCTTCTGAATCATCAAATAGGGTTCATTCAAACACAGATATAACATCAGATGTTGAAATGGCCAAAAAGGGTATTTCCAGAATTTCCAGAAATATTAAAGTAAGTCAGAAAGACAAAGACCAATGTAGAAAGCTACTTCGTATGCATCAGAAAAATAAACGTAATTTGAAAAATGATTTGGACAAGAAAATAGCTGATTTTAAAACAGCGCGCCAAATAGAGTGGAACGCTATCATCAAACCCTCTATGAAAAAAGAAGAGACGACCAAAAACAGAGAGATATTAAAAAAATTTAGAAGTGGATATACTGCTGGAATTGAAAAATTGAGAAGTGAGTATGATGAACTTCTCAAGGCTCTTGAGACCAAACATTTAGAAGCACAGAAGAAATTCGAGTCATCAGCACCAGATGAATTGTCAAACCTAGTTTCTTCGAAGGAACTCAAAACACTCCATAATGCTCCAAACGTCCTTCTGTCCGATGAAGTGCCAGAAACTAGTCATAAACGAGCCACTGCCAGTGAATTGAGTAGGGATGCGACTGTGGGATTGCCCAGCACAGTCAGTAATGATTATCCAGAGAATGCAGCTCCTTTGAATTCTTCGTCCACAGATCAAATATCTGATGGAGGTTTAGATCGGGTTGTATCATCAAGGCCCTGTAGCCCTTCTAGTCCAAGTAATGGTCGTCCAGCTACAATTTACCTTTTGAAGTCACCTCCTTCAACTCAACAAGTTCCTGATAGAGTCTTGCCGACCATAACTGATGGACAAATACCAGTCACAGTGCCAGAATTGAGTAGGGAGGCAGCTGTGGGATTTCCCAGCACAGTTAGAAGTACTGATTGTCCAGAGAATGCAGCTCCTCTGAATTCTTCATCAACAGATCAAATATTTGATGGAGGTTTAGATGGGGTTGTATCTTCAAAGCCTTGTAGCTCTTCTAGTCCAAGCAATGGCCGGCCAGCTACATATTCCCTTTTGAATTCACCTTCTTCAACTCAACAAGTTCCTGGCAGAGGGTTGCCAGCCATAACTGATGGACAAATACCAGTCACAGTGCCAGAAAATAGTCCTGTAGAGGCTGAATGTCAACTAAGAGACAATGTGGTAGTGAATGAGAGTACCAAATCAGACTACCAAGAAGTAGCACATAGAACCACGACAAAAAACACTTTGTCCCATGAGACTCCAGTATCTATACCTGTGGATCCAATTGAGCCTCAAGAACAAGTGCAGGTGCAGCCATTATCATCTGTAGAGTCATTGCCTAGTCCAGTTTGTACTTTACCTGCTAATCAATCCAACCATGTTTCAATGGTCATGGAGCCTCCAGAGCAGGTGCAGCAACTACATTCTTCAGGCCTCCTTTCTTCCAACCTGGATTCCTCTAACTTACCTTTGGCGACTGGAGGTGAACACCGGGCAGCGACCAATGAAGATGGTCTTTCTGGCCAGATTCCCGAGGCATCAGCTGAGGTTCAAAATCAAGCCGTTGTGCAACCTGCCTTGAATTTGGAAATTGATTCACATTCACGTCAAGTTGTGCCTCCAGTCGCAAACATGGTCCTTGATTCCCTTGTGCCTGGTGGAGTCAGAGCCCAATCATCAGACACAAGAAATATGTCAACTCACAGAGTTATCAATAGTCATCCTATTCAAACTCCAGCACAATCAGCTTCGAGGAATGTTCAACCTTTCTTATATGATCCACTTAATTATGAATTGGCAAGAATACGTAAACTGATGGAACAAAATATGAAAAACCAGGAAGATGCGAAATTACAGCTGAAATGTAATCTTGAGAAGGAAATTCAGGAACTTCACAGGAAGTATGATATTCAAAGGAAGGAGATTGAGGTTAAATTTCAGGAAGCGGGGAAGAACTATGAGAAACAATATAAAACAGTTTTTTTACATAAAATATTGGCCGAAACTGTTATAAAGGCTAATTTTGATCCTAGGTTTTCTGGTGCATCGGGAATGCTGCAAGATCCAGGATATTCACAGCATTTATTTCAGCCTTCAAGACAGCCAAATGCTACTGGGCCCTCTCCAGTTGTTAGTCAATCTTGCCGTGGACCTCCTGCAACTGCTTTCCAGAATTCTCACGCTTCAACTGGCTCTCACACTATGGTACCACCACCTATACAGGCCTCTTACAATACATCGGGAAATTTCAGTGGTATTTCTGCAAGACGACCGCATATCAACTCCATCTCTTCATCCTCAGGAAATCTTCAAGCTGGTCGGGAGATACGTGCCCCTCCACCGCATCTTACGCCTTATAGTTCCCCAACATCTGTACCAGCCTCCAGTCTTGGTGGGGGGATCCGCACCCCTCCACCGCATCTCTCGCCTTATAGACCCTCAACATCTGGACCAGCCTCCAATCTTAGTGGGGAGATACGCACCCCTGCACCACATCTTTTACCTTGTAGACCCTCAACATTTGTACCACCATCTAGTCTCAGTGAAGTTCCACATGCTATGCCAAGTCAACCAGCACCTGGTAACTCTCAGTGGCATTCCAGACCAATGCCGGCAATCTCTCAGTTTGGTCCTCATAGGGGACACGGGCATGCGAACACAGGTGTGTTCCCCACTCCTAACGTATCTGCCATGGATATGCGCTTGAGTGCTAATAGTCAATCTAGCATTAATCTGCCAAATACTCAGCAACATACGTCAGATTTGGCTTCTTTGAATCATTCTCAACCTGGCACAAGTAGCCACATGCGGGCTAACTCGGTCCAAGAAGCCACACCTTCTGATGTTGTCTGTTTATCAGATGATGACTGA 4143 0.421 MIPTRSSSQNHNKKIKTTTTTPSPLRRSERNRNVSSSSTSINNHSPVTSRTPVSKRHVSPKEKKNRDEEKDKEKEISLNRKVKKMDARVYRRILTRKKAKDCQKETNNEDENRSTAEDSKVGGDKTDEELKETSLQCKEVFEDCNLPAEDAKATDMSAESRSSGSVKELSENNNGTIGSTVVPSNSSTHETSGIPEKVEEETSQMLVTRGSDSNESLIRKCVGNDKDGSLTPCKRKSTLVDMCSDVSATLVDDGNCNLILDADSERLHCNVVETNRPSKRIRGMNNVDLPASKSNDEKSSTRNKEGKSGDSAEKPQGNNVETEKIRKQQRSLHLSLKPEIAKLCEILLLPDSVKSMVGKFLEYTMNNYKICTEPVSILQAFQLSLCCTAASLLRHKFDTADSLILAKQHLSFDCKKDAVDEINAMLWDLKDNFLLLTENTNVNCSPKASESSNRVHSNTDITSDVEMAKKGISRISRNIKVSQKDKDQCRKLLRMHQKNKRNLKNDLDKKIADFKTARQIEWNAIIKPSMKKEETTKNREILKKFRSGYTAGIEKLRSEYDELLKALETKHLEAQKKFESSAPDELSNLVSSKELKTLHNAPNVLLSDEVPETSHKRATASELSRDATVGLPSTVSNDYPENAAPLNSSSTDQISDGGLDRVVSSRPCSPSSPSNGRPATIYLLKSPPSTQQVPDRVLPTITDGQIPVTVPELSREAAVGFPSTVRSTDCPENAAPLNSSSTDQIFDGGLDGVVSSKPCSSSSPSNGRPATYSLLNSPSSTQQVPGRGLPAITDGQIPVTVPENSPVEAECQLRDNVVVNESTKSDYQEVAHRTTTKNTLSHETPVSIPVDPIEPQEQVQVQPLSSVESLPSPVCTLPANQSNHVSMVMEPPEQVQQLHSSGLLSSNLDSSNLPLATGGEHRAATNEDGLSGQIPEASAEVQNQAVVQPALNLEIDSHSRQVVPPVANMVLDSLVPGGVRAQSSDTRNMSTHRVINSHPIQTPAQSASRNVQPFLYDPLNYELARIRKLMEQNMKNQEDAKLQLKCNLEKEIQELHRKYDIQRKEIEVKFQEAGKNYEKQYKTVFLHKILAETVIKANFDPRFSGASGMLQDPGYSQHLFQPSRQPNATGPSPVVSQSCRGPPATAFQNSHASTGSHTMVPPPIQASYNTSGNFSGISARRPHINSISSSSGNLQAGREIRAPPPHLTPYSSPTSVPASSLGGGIRTPPPHLSPYRPSTSGPASNLSGEIRTPAPHLLPCRPSTFVPPSSLSEVPHAMPSQPAPGNSQWHSRPMPAISQFGPHRGHGHANTGVFPTPNVSAMDMRLSANSQSSINLPNTQQHTSDLASLNHSQPGTSSHMRANSVQEATPSDVVCLSDDD 1380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01588 1380 MobiDBLite consensus disorder prediction 603 680 - -
Trre7g01588 1380 MobiDBLite consensus disorder prediction 723 785 - -
Trre7g01588 1380 MobiDBLite consensus disorder prediction 1 54 - -
Trre7g01588 1380 MobiDBLite consensus disorder prediction 1114 1196 - -
Trre7g01588 1380 Coils Coil 486 513 - -
Trre7g01588 1380 MobiDBLite consensus disorder prediction 295 327 - -
Trre7g01588 1380 MobiDBLite consensus disorder prediction 1333 1380 - -
Trre7g01588 1380 MobiDBLite consensus disorder prediction 1268 1292 - -
Trre7g01588 1380 Gene3D - 1015 1096 - -
Trre7g01588 1380 Coils Coil 1027 1054 - -
Trre7g01588 1380 MobiDBLite consensus disorder prediction 1333 1371 - -
Trre7g01588 1380 MobiDBLite consensus disorder prediction 665 680 - -
Trre7g01588 1380 PANTHER HELICASE PROTEIN MOM1 1224 1380 IPR039322 GO:0031507
Trre7g01588 1380 Coils Coil 553 577 - -
Trre7g01588 1380 MobiDBLite consensus disorder prediction 726 746 - -
Trre7g01588 1380 MobiDBLite consensus disorder prediction 157 192 - -
Trre7g01588 1380 MobiDBLite consensus disorder prediction 626 658 - -
Trre7g01588 1380 MobiDBLite consensus disorder prediction 98 132 - -
Trre7g01588 1380 MobiDBLite consensus disorder prediction 280 327 - -
Trre7g01588 1380 MobiDBLite consensus disorder prediction 755 785 - -
Trre7g01588 1380 MobiDBLite consensus disorder prediction 825 844 - -
Trre7g01588 1380 MobiDBLite consensus disorder prediction 55 80 - -
Trre7g01588 1380 MobiDBLite consensus disorder prediction 1114 1247 - -
Trre7g01588 1380 MobiDBLite consensus disorder prediction 148 211 - -
Trre7g01588 1380 MobiDBLite consensus disorder prediction 1 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01588 Trre-Chr7 12031320 12042781 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01588 - - cam:101500562 1548.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g01588 7 12031320 12042781 Trre7g01588 7 12031320 12042781 ECH
Trre11g04307 11 55608771 55621290 Trre7g01588 7 12031320 12042781 PCT