Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01560 ATGGGGAAGAAGAAAAATAAGGGTAATGGAGGAAACAACAACAACAACAGCAACAATGGAGGAAACGAAGAAAGCAACAATGGAGAAAATAAGGAAGACAACAACAACAACAACAATACATTGATTTTGAAAGTTCATATGCATTGTGACGCTTGTGCTGCCAAAATCACCAAATACCTTGACTCCATCAAAGGTGTTGAAACGGTGAAAACAGACAGTGAGACCGGAAAAGTAACCGTCGTCGGAAAAGTGGACCCCATAAAAGTTAGGGATAACCTTGCAGAGAAGATAAAGAAGAAAGTTGAACTTATTTCTCCACAACCCAAAAAGGAGAAAGAGAATAACAACAACAACAACAAGGAAAATGGACCAAACAACAACAAATCTGATGAGAACAAAATTGATGACAAAAAAGAGTTGATTACTACTTCTGTTTTGAAAATGGTACTACACTGTCAAGGTTGTATTGACAAGATTGGAAAGATTGTGCTGAAAACCAAAGGGGTTCTTGATATGAAGATAGACAAAGAGAAAGATAATGTGACTGTAAAGGGTACAATGGATGTGAAAGGGCTAGTTGACAATTTATCAGAGAAGCTTAAGAGGAAGGTTGAGGTGGTTCCTCCTAAGAAAGACAAGGAAGGTGGTGGTGGTGGTGGTGGTGGTGAGAATGAAGGTGGAGGAGGGAAGAAAAAGAACAAGGGATGTGGTGGTGGAGGAGGAGGAGAAGGGGGAGATAATGAAGGAGAAGTTAAAATGATGGAGCATTTTGTTCAAGTTCAACCACCATTTGGTTATGGTTATGGAAATGTTGAGGGCTATAATGGACAAGTTTATCAAGAGTTGATACATTATCATATGCATTCACAACCACCACAAATGTTTAGTGATGAGAATCCTAATGCTTGCATTGTCATGTGA 921 0.3898 MGKKKNKGNGGNNNNNSNNGGNEESNNGENKEDNNNNNNTLILKVHMHCDACAAKITKYLDSIKGVETVKTDSETGKVTVVGKVDPIKVRDNLAEKIKKKVELISPQPKKEKENNNNNNKENGPNNNKSDENKIDDKKELITTSVLKMVLHCQGCIDKIGKIVLKTKGVLDMKIDKEKDNVTVKGTMDVKGLVDNLSEKLKRKVEVVPPKKDKEGGGGGGGGENEGGGGKKKNKGCGGGGGGEGGDNEGEVKMMEHFVQVQPPFGYGYGNVEGYNGQVYQELIHYHMHSQPPQMFSDENPNACIVM 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01560 306 MobiDBLite consensus disorder prediction 1 37 - -
Trre7g01560 306 MobiDBLite consensus disorder prediction 7 37 - -
Trre7g01560 306 CDD HMA 150 185 IPR006121 GO:0046872
Trre7g01560 306 CDD HMA 43 99 IPR006121 GO:0046872
Trre7g01560 306 ProSiteProfiles Heavy-metal-associated domain profile. 141 212 IPR006121 GO:0046872
Trre7g01560 306 SUPERFAMILY HMA, heavy metal-associated domain 142 204 IPR036163 GO:0046872
Trre7g01560 306 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 18 306 IPR044594 GO:0046872
Trre7g01560 306 MobiDBLite consensus disorder prediction 100 134 - -
Trre7g01560 306 ProSiteProfiles Heavy-metal-associated domain profile. 38 109 IPR006121 GO:0046872
Trre7g01560 306 MobiDBLite consensus disorder prediction 100 117 - -
Trre7g01560 306 Gene3D - 139 214 - -
Trre7g01560 306 SUPERFAMILY HMA, heavy metal-associated domain 40 103 IPR036163 GO:0046872
Trre7g01560 306 Gene3D - 34 112 - -
Trre7g01560 306 Pfam Heavy-metal-associated domain 44 100 IPR006121 GO:0046872
Trre7g01560 306 Pfam Heavy-metal-associated domain 150 205 IPR006121 GO:0046872
Trre7g01560 306 MobiDBLite consensus disorder prediction 206 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01560 Trre-Chr7 11774147 11775417 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01560 - - mtr:25492402 297.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g01560 7 11774147 11775417 Trre7g01560 7 11774147 11775417 ECH
Trre11g04334 11 55867381 55868578 Trre7g01560 7 11774147 11775417 PCT