Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01506 ATGGTAGCCGCCGTTATTCTCTTCACCGTCACGGTTCTATCGGCGGCTGCTATTTCTTCATCACCGGTTACTCTTACACTTGAAAGAGTTTTTCCTTCTAATCATGGAGTTGAATTGAGTTACCTTAAAGCTTTGGATAGTTTCAGACATCAAAGATTTTTGCAGTCTACTAACTATGTTGTCAATTTTCCTGTTAAAGGATCCTTTGATACCTCAAAAGCAGGGCTTTACTTTACAAAGGTGAATTTAGGTACTCCTCCAAGAGAATTTTATGTGCAAATTGACACTGGTAGCGATGTTCTCTGGGTTAGTTGTGCATCCTGCAATGGTTGTCCTCAAACAAGTGGTCTCCAAATTCAGCTCAATTACTTCGACCCTCAGAGTTCATCGACATCTTCATTCATCTCTTGTTCTGACCAAAGGTGCAAGAATGGAGTACAATCATCGGATAGCAGTTGTTCCAGTCGGAATAACCAATGCACGTACATATTCCAGTATGGAGATGGTAGCGGAACATCAGGCTATTATGTGTCGGACTTGATGCATTTTGCTAGTATTACTGAGGGATCTTTGTTGTCAAATTCCTCGGCACCTGTGGTTTTTGGTTGTAGCAACCAGCAAAGTGGGGACTTGACAAAGTCTGATAGAGCAATCGATGGTATATTTGGATTTGGGCAACAGGGTATGTCAGTAATTTCCCAGCTCGCTTCACAAGGAATAGCACCAAGAGTGTTCTCGCATTGCTTGAAAGGAGATAGTAGCGGTGGCGGCTTATTGGTTCTTGGTGAGATTGTGGAGCCAAACATAATTTATAGTCCACTCGTTCCGTCACAGCCACATTATAATCTAAATCTTCTGAGCATCTCTGTCAATGGCCAAAATTTGCCAATTGATTCTTCTATTTTTGCTACATCAAACAATAGAGGTACCATTATTGATTCTGGAACAACTTTGGCATACATTGCAGAAGAAGCTTACAATCCCTTTATCAATGCGATTACAGCTGCTATTCCACAATCTGTGCGCACTGTTCTTTCCAGGGGAAATCAGTGTTACTTAGTTACTACCAGCCTTGACGATTTTCCTCAAGTAAGTCTGAACTTTGCTGGTGGTGCATCTCTCGTTTTAGGACCACGGGACTACCTTATAAAGCAGACATATATTGGAGATGGATCAGTATGGTGTATTGGTTTTCAAAAAATTCCAGGTCAAGATGTAACAATTCTAGGAGACCTTGTACTGAAAGACAGAATTTTTGTATATGATCTTGCTGGTCAACGCATTGGATGGGCTAACTATGACTGTTCGTTGTCGGTTAATGTTTCTGCATCAACTGGTAACGGAAGAAGCGAGTTTGTCAACGCAGGTGACATAAGTGGAAGCAGTTCTTTACGCGATGGATCTTACAAGTTGATAAACAGAAGAGGGATCTTTGCTGTCTTCATGCACATAACACTGATATGCTATTTTGTATTCTTGTAG 1482 0.4116 MVAAVILFTVTVLSAAAISSSPVTLTLERVFPSNHGVELSYLKALDSFRHQRFLQSTNYVVNFPVKGSFDTSKAGLYFTKVNLGTPPREFYVQIDTGSDVLWVSCASCNGCPQTSGLQIQLNYFDPQSSSTSSFISCSDQRCKNGVQSSDSSCSSRNNQCTYIFQYGDGSGTSGYYVSDLMHFASITEGSLLSNSSAPVVFGCSNQQSGDLTKSDRAIDGIFGFGQQGMSVISQLASQGIAPRVFSHCLKGDSSGGGLLVLGEIVEPNIIYSPLVPSQPHYNLNLLSISVNGQNLPIDSSIFATSNNRGTIIDSGTTLAYIAEEAYNPFINAITAAIPQSVRTVLSRGNQCYLVTTSLDDFPQVSLNFAGGASLVLGPRDYLIKQTYIGDGSVWCIGFQKIPGQDVTILGDLVLKDRIFVYDLAGQRIGWANYDCSLSVNVSASTGNGRSEFVNAGDISGSSSLRDGSYKLINRRGIFAVFMHITLICYFVFL 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01506 493 Gene3D Acid Proteases 263 443 IPR021109 -
Trre7g01506 493 PRINTS Pepsin (A1) aspartic protease family signature 83 103 IPR001461 GO:0004190|GO:0006508
Trre7g01506 493 PRINTS Pepsin (A1) aspartic protease family signature 310 321 IPR001461 GO:0004190|GO:0006508
Trre7g01506 493 PRINTS Pepsin (A1) aspartic protease family signature 407 422 IPR001461 GO:0004190|GO:0006508
Trre7g01506 493 CDD pepsin_A_like_plant 77 435 IPR034161 -
Trre7g01506 493 Gene3D Acid Proteases 50 262 IPR021109 -
Trre7g01506 493 FunFam Aspartic proteinase-like protein 2 264 442 - -
Trre7g01506 493 Pfam Xylanase inhibitor C-terminal 280 431 IPR032799 -
Trre7g01506 493 FunFam Aspartic proteinase-like protein 2 60 263 - -
Trre7g01506 493 SUPERFAMILY Acid proteases 74 438 IPR021109 -
Trre7g01506 493 PANTHER ASPARTYL PROTEASES 9 429 IPR001461 GO:0004190|GO:0006508
Trre7g01506 493 ProSiteProfiles Peptidase family A1 domain profile. 77 431 IPR033121 -
Trre7g01506 493 Pfam Xylanase inhibitor N-terminal 77 262 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01506 Trre-Chr7 11286061 11290255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01506 51 436 Miscellaneous Gene Families AT1G44130 27.407 4.58e-38 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01506 - - gmx:100789004 771.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g03690 11 50132577 50136893 Trre7g01506 7 11286061 11290255 PCT