Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01502 ATGGCTTCTCCTTCTTCAACACGCTTAGATCTCGACGGTAACCCAATCAAACCTTTAACAATTTGCATGATCGGTGCCGGAGGTTTCATCGGTTCTCATCTCTGTGAAAAACTCATGAATGAAACTTCTCACAAAGTTCTCGCTTTAGATGTTTACAATGACAAAATCAAACATCTTCTAGAACCTGAATCTCTTCCTTGGAATGGTCGCATTCACTTTCACCGTCTTAATATTAAAAACGATTCTCGACTTGAAGGTCTCATTAAGATGGCAGATCTGGTTATAAATCTGGCTGCAATTTGTACTCCTGCTGATTACAATACGCGTCCTCTTGATACAATTTATAGCAATTTCATCGATGCACTTCCTGTGGTGAAGTACTGTTCTGAAACTAATAAGAGGCTTATTCATTTCTCTACTTGTGAAGTGTATGGAAAAACTATTGGAAGTTTTCTTCCAAAAGATAGTCCTCTTCGTCAGGATCCTGCATATTATGTGCTTAAAGAAGATGAGTCTCCATGCATTTTTGGTCCAATCGAAAAGCAGAGATGGTCGTATGCATGTGCAAAGCAGTTGATTGAGAGACTGGTTTATGCTGAGGGTGCTGAAAATGGCTTGGAGTTTACAATTGTGAGGCCTTTTAATTGGATTGGACCCAGAATGGACTTCATTCCCGGTATTGATGGTCCAAGTGAGGGTGTTCCTCGAGTTCTTGCATGCTTCAGCAATAATCTTCTCAGAGGAGAACCCCTCAAGCTTGTGGATGGTGGTGAATCCCAGAGAACCTTTGTGTACATCAAAGATGCTATTGAAGCTGTCTTATTGATGATTGAAAATCCTGCCAGAGCCAATGGCCACATCTTTAATGTGGGTAACCCAAACAATGAGGTTACAGTTAGGCAACTTGCTGAAATGATGATCAAGGTCTATTCAAAGGTTAGTGGAGATCAACCTCCTGAAACAACTACAATTGATGTGAGCTCGAAAGAATTTTATGGTGAAGGATATGATGATAGTGACAAGAGAATTCCTGACATGACCATAATAAACAAGCAGCTCGGATGGAATCCAAAGACCTCGCTTTGGGATCTGCTTGAATCCACACTTACCTATCAGCACAGGACATACGCCGAAGCCATTAAGAAAGTCATTGCACAACCCATTACAAGTTAA 1173 0.4084 MASPSSTRLDLDGNPIKPLTICMIGAGGFIGSHLCEKLMNETSHKVLALDVYNDKIKHLLEPESLPWNGRIHFHRLNIKNDSRLEGLIKMADLVINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSETNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDESPCIFGPIEKQRWSYACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRGEPLKLVDGGESQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMIKVYSKVSGDQPPETTTIDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLESTLTYQHRTYAEAIKKVIAQPITS 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01502 390 Gene3D - 19 381 - -
Trre7g01502 390 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 20 373 IPR036291 -
Trre7g01502 390 Pfam NAD dependent epimerase/dehydratase family 21 291 IPR001509 -
Trre7g01502 390 CDD Arna_like_SDR_e 20 375 IPR045869 GO:0016831
Trre7g01502 390 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 20 375 - -
Trre7g01502 390 FunFam UDP-D-apiose/UDP-D-xylose synthase 2 19 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01502 Trre-Chr7 11230173 11232634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01502 19 385 Miscellaneous Gene Families AT1G02000 21.859 1.84e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01502 K12449 - gmx:100792879 737.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g04404 11 56399908 56403638 Trre7g01502 7 11230173 11232634 PCT