Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01426 ATGGCAGAAGTTCTACACTCTTGTGATCCCATTCACATTCTCACTACCGACCAAGAACAATCACCATCATCTTCTTCATCTTCTTTTTCTTCTTTAGCCGTAGCAGTGAACGGTAGTTTTTCTATGGTAACTGACTGTGAACAAGAGGAGATGACTGTGACAGAGAAGAGAGAAAAAACAGCACAAGAGCTATCCCTTTTGGCCATTCTTGTGACCCTTTTCAGGAAATCTTTTATTTCTTGCTCCAATGATGTTGCCATGGAAATTGGTCACCCTACTAATGTGCGCCATGTTGCACATGTTACTTTTGATAGGTTTAATGGTTTCTTGGGTTTGCCTCTTGAGTTTTTACCTCAAGTCCCCACTACACCTCCTAGTGCTAGTGCAACTGTTTTTGGAGTTTCAACAGAATCCATGAAATTATCATATGACACAAGAGGGAACATTGTGCCAACAATTCTACTACTAATGCAAGAACACCTGTATGCTCAAGGAGGATTACAGGCAGAGGGAATTTTCAGAATTAATGCAGACAATAGACAAGAGGAATATGTTAGGGATCAATTAAATAAGGGAGTGGTCCCACAAAACATTGATGTACATTGTTTAGCAGGTTTGATTAAGGCTTGGTTTAGGGAGCTGCCAAGAGGTGTTCTGGATTCTGTATCTCCAAACCAGATAATGCAATGTCAAACAGAAGAGGATTGTGCCGAACTGACGAATCAGCTACCTCATACTGAAGCTTCCCTTTTGGATTGGACTATCAATCTGATGGCTGATGTTGTACAAGAGGAACATCTGAATAAAATGAATGCACGCAACATTGCCATGGTTTTTGCACCAAACATGACTCAGATGGCAGACCCTTTGACTGCATTGATGTATGCAGTTCAAGTGATAAATTTCTTGAAGACACTTGTAACAAGGACACTGAGGGAAAGGAACAATACTAATGTAGAATCATCACATGAATTTTATATAAAGCCTTTTGATGATAACAGTCTTTTGAAATCATGCCAGCAAGATGTTGTTGCAACAGAAAATGAAATGCTAATCAATGAAGCAATTTGA 1071 0.395 MAEVLHSCDPIHILTTDQEQSPSSSSSSFSSLAVAVNGSFSMVTDCEQEEMTVTEKREKTAQELSLLAILVTLFRKSFISCSNDVAMEIGHPTNVRHVAHVTFDRFNGFLGLPLEFLPQVPTTPPSASATVFGVSTESMKLSYDTRGNIVPTILLLMQEHLYAQGGLQAEGIFRINADNRQEEYVRDQLNKGVVPQNIDVHCLAGLIKAWFRELPRGVLDSVSPNQIMQCQTEEDCAELTNQLPHTEASLLDWTINLMADVVQEEHLNKMNARNIAMVFAPNMTQMADPLTALMYAVQVINFLKTLVTRTLRERNNTNVESSHEFYIKPFDDNSLLKSCQQDVVATENEMLINEAI 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01426 356 SMART PBD_5 89 123 IPR000095 -
Trre7g01426 356 ProSiteProfiles Rho GTPase-activating proteins domain profile. 134 311 IPR000198 GO:0007165
Trre7g01426 356 PANTHER MKIAA1688 PROTEIN 1 332 IPR044785 GO:0005096
Trre7g01426 356 Pfam RhoGAP domain 151 285 IPR000198 GO:0007165
Trre7g01426 356 ProSiteProfiles CRIB domain profile. 89 102 IPR000095 -
Trre7g01426 356 SMART RhoGAP_3 148 311 IPR000198 GO:0007165
Trre7g01426 356 Gene3D Rho GTPase activation protein 122 320 IPR008936 -
Trre7g01426 356 CDD RhoGAP 151 308 - -
Trre7g01426 356 Pfam P21-Rho-binding domain 88 113 IPR000095 -
Trre7g01426 356 SUPERFAMILY GTPase activation domain, GAP 129 308 IPR008936 -
Trre7g01426 356 CDD CRIB 87 130 - -
Trre7g01426 356 FunFam Rho GTPase-activating protein 5 119 312 - -
Trre7g01426 356 Gene3D CRIB domain 83 120 IPR036936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01426 Trre-Chr7 10501674 10504154 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01426 - K20642 gmx:100784019 474.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g01426 7 10501674 10504154 Trre7g01426 7 10501674 10504154 ECH
Trre11g03800 11 51328408 51331151 Trre7g01426 7 10501674 10504154 PCT