Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01397 ATGTCTACAAAAGAATGCGGCCATCATGACGGTGGTGGCGGCGCCCTCCGCCGTATAATGGCCGCCATAGTAGCCTTCATTTTCCTTATCCTCTTAACAATCTTCCTAATATGGGTCATCCTTAGACCAACAAAACCACATTTCATAATCCAAGATGCAACAATTTACACTTTCAACATCTCATCACCAAATTCTTCACCATTTCCTATTCCCAACACACTAACCCTCACAATGCAAATCACACTCTCAATTCATAACCCAAACAACAAAATAGGAATTTACTATCAAAAACTTCACGTGTATGGTTCTTATAAAAACCAACAAATCTCACTACCAACTTCACTTCCTGATACTTACCAAGGCCATAAAGATTTTACCATTTGGTCGCCGTTTATTTACGGTGTTGGTGTTCCGGTTGCACCTTTTACGCTTAGCTCAATGCAACAGGATCAGAATAACGGAATGGTTTTGGTTAACATCAAAATTAACGGAAGAGTTAAGTGGAAGGTGGGGACTTGGATCTCTGGGAGGTACCATCTTTTTGTTAATTGTCCTGCTTATGTTCGATTCGGCAGTGATCGGATTAATGGCGTCGGAGTTGTTGCTCCGGCAGTTAAGTTTCAGCTTTTGCAAAAATGTAAAGTTGATGTTTAG 654 0.4067 MSTKECGHHDGGGGALRRIMAAIVAFIFLILLTIFLIWVILRPTKPHFIIQDATIYTFNISSPNSSPFPIPNTLTLTMQITLSIHNPNNKIGIYYQKLHVYGSYKNQQISLPTSLPDTYQGHKDFTIWSPFIYGVGVPVAPFTLSSMQQDQNNGMVLVNIKINGRVKWKVGTWISGRYHLFVNCPAYVRFGSDRINGVGVVAPAVKFQLLQKCKVDV 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01397 217 PANTHER OS05G0367900 PROTEIN 17 214 IPR044839 GO:0098542
Trre7g01397 217 Pfam Late embryogenesis abundant protein 81 184 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01397 Trre-Chr7 10296609 10297262 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01397 - - gmx:100812905 285.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g03836 11 51624536 51625201 Trre7g01397 7 10296609 10297262 PCT