Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01387 ATGAACCAAGAGAAATCATGTGTGCTAGTTAGAGTGTGGGAAAAGATAAAGGCTTTGCCAAAGGCTCTTATGAAGAAAGTGTTATGCATTTGTAAGATGTCAAAAGAAATAGCACAAGATGATCCAAGAAAAGTGATTCATTCACTAAAAGTTGGACTTGCAATCTCCTTAGTGTCTCTATTTTACTACTATCAACCACTTTATGAAAATTTTGGTCTTTCAGCAATGTGGGCAGTGATGACTGTTGTAGTAGTTTTTGAGTACACAGTTGGAGCTACTTTAGGAAAAGGTTTGAATAGGACAATGGCAACATTGGTGGCTGGTGCTCTAGGAGTTGGTGCTCATTACTTAGCTAGCTTATCAGGAGAGACAGGGGAACCAATTCTAATTGGATTCTTTGTATTTTTACAAGCTGCAATAGCATCATTTATAAGGTTCTTTCCAGAAGTGAAAACAAGATATGATTATGGGATGCTAATATTTATCTTGACATTCTCTTTAATATCTGTATCTGGATTTCGTGATGATGAAGTATTAAAAATGGCTCATAAAAGATTATCCACCATTTTTCTTGGAGGTTCTGCTTGTGTTATGATTTCCATTTTTGTTTGTCCTGTTTGGGCTGGTGAAGAGTTGCACTATTCCATTGCTCAAAAATTGGAAACACTTGGTGACTTCTTAGAAGCATTTGTAGGTGAATATTTCAAAACATCAAAGGAAGAAGAATCTAAAGATAAAAAGTCATTTCTTGAAGGTTATAAAAGCATTCTCAATTCTAAAAGTAATGATGAGTCACTGGTCAATTTTGCAAGATGGGAACCAGGTCATGGAAAGTTCAAATTTCATCATCCATGGAGTCAATACCTTAAAATTGGTGCTCTTTCTCGCCAATGTGCTTATAGAATGGAATCTCTAAACGAACAACTCAATTCTGACACTAAAGGATCACCCGAAATTCGTTGTACAATCCAAGAACTATGCACAGAAATGTGTTTAGAATCAAGCTTGGCACTGAAACAATTGAGTTCATCAATCAAAACAATGAAAAGGAAATCTTCGCCGGATACACACATTGCGAACGCAAAAGCCGCGGTGAAAAGCCTTAACTCATTGCTCCAATCAAGTTTATGGAAAGAAAATGATCTTTTATCAGTAATACCAGCTGTGACAGTGGCTTCATTACTAATTGATATTGTTGATTGCACAGAAGAAATAGCAGACTCTGTTAATGTTCTTGCTTCAATTATTCATTTTCATAATTTAGATGATGATGAAAAGTCCCCTAAAGAAGTGTCACAATCTCCAACATGTCAATGTGCTGAACCAGATCCTAAGATTGAGAACTCACATGTGGTTATTATAGTTGAGGATTCAATGTGTGATAAATGTAACAAAGTTTGA 1401 0.3569 MNQEKSCVLVRVWEKIKALPKALMKKVLCICKMSKEIAQDDPRKVIHSLKVGLAISLVSLFYYYQPLYENFGLSAMWAVMTVVVVFEYTVGATLGKGLNRTMATLVAGALGVGAHYLASLSGETGEPILIGFFVFLQAAIASFIRFFPEVKTRYDYGMLIFILTFSLISVSGFRDDEVLKMAHKRLSTIFLGGSACVMISIFVCPVWAGEELHYSIAQKLETLGDFLEAFVGEYFKTSKEEESKDKKSFLEGYKSILNSKSNDESLVNFARWEPGHGKFKFHHPWSQYLKIGALSRQCAYRMESLNEQLNSDTKGSPEIRCTIQELCTEMCLESSLALKQLSSSIKTMKRKSSPDTHIANAKAAVKSLNSLLQSSLWKENDLLSVIPAVTVASLLIDIVDCTEEIADSVNVLASIIHFHNLDDDEKSPKEVSQSPTCQCAEPDPKIENSHVVIIVEDSMCDKCNKV 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01387 466 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 17 423 - -
Trre7g01387 466 Pfam Aluminium activated malate transporter 36 413 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01387 Trre-Chr7 10234712 10237711 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01387 24 457 Miscellaneous Gene Families AT2G27240 53.394 3.50e-170 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01387 K25841 - gmx:100813430 656.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g03860 11 51798001 51800286 Trre7g01387 7 10234712 10237711 PCT