Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03860 ATGAACTTGCCTAGTGAATTTACTACTAATGTAGTCAATGTAATGTTGCAGCTAAAGAAACTAGGAAAAGATGATCCTAGAAGGGTCATTCATTCTTTGAAAGTAGCACTTGCTATTACATTGGTTTCAACATTTTACTATTTTAAACCACTTTATGATAGTTTTGGTTCTTCTGCAATGTGGGCTGTTATCACTGTTATTGTTGTCTCTGAATTCTCTGTAGGAGCAACGCTTGGAAAAGGTTTAAATAGAGGTTTTGCAACATTTTTGGCTGGTGTTCTTGGACTTGGATCATATTACATAGTTCATTTAATTTCAAGTGGAAATACAATAATGGAATCCATACTTCTTGGAATAATAATATTTCTAGCAACTGCAGGGGTGACATATATTAGATTTTTACCTCAAATGAAAGCTAGATATGATTATGGTTTGCTAGTGTTTATCTTGACATATTGTTTGGTATCTGTATCAAGCTATAGAGATCATGATATAATTGACACTGCACAAGATAGGGTAACAACAATTCTAGTTGGTCGATTAATTTCTTTGTTGGTTAACATTTTCTTGTGCCCTGTTTGGGCTGGTGGTGATCTTCAAAATCTAGTTTCAAGTAACATTGAAAAACTTGGCAACTTTTTAGAAGGTTTTGGAGATGAATATTTTGGAACATTAGAGGCTAGAAAATCAAATAAATCACTTATGCAAGGATATAAGAGTGTTCTTAATTCGAAACAAGTTGAAGATAACTTGACAAATTTTGCGAGGTGCGAGCCTTGCCATGGACGTTTTGGATATCGTTATCCATGGCAACAATATCAAAAGATTGGAAACCTATCAAGGCAGTGCGCATATCGGATTGATGCCCTTAACGGCTTCCTTAACAACGATATTAAGACACCAAAGGAAATTAGAAGCAAAATACAAGAACCATGCATCAAGATGAGCATAGAAACAGGAAAGGCTTTAAAACAATTAGCAATATCAATCCAAAAAATGATTCCACCAACTGCAGCTGAAACTCACATTGCAACATCTAAGATTTATGCCACAAATCTTAAATCCATGATTAAAACAAAATTATGGGAAGACACAAATTTGTTTGAGGTTGTTCCTGTTGTAACTGTAGCTTCATTATTGCTTGATGTGGTTTCTTCCATTGAGAAACTTGGAGAGTCAATACAAGAACTATTCACCTTAGCAAAATTTAAGAACATAGAAAGTAAAGTTGCTGCAGAGGATAAAAAACAAGTTCCACAACCATGTTGTAATAGTAGTGGACCTCAACATGTTATTACAATAGTTCCAAAAAGTATTGTTCTATGA 1326 0.3416 MNLPSEFTTNVVNVMLQLKKLGKDDPRRVIHSLKVALAITLVSTFYYFKPLYDSFGSSAMWAVITVIVVSEFSVGATLGKGLNRGFATFLAGVLGLGSYYIVHLISSGNTIMESILLGIIIFLATAGVTYIRFLPQMKARYDYGLLVFILTYCLVSVSSYRDHDIIDTAQDRVTTILVGRLISLLVNIFLCPVWAGGDLQNLVSSNIEKLGNFLEGFGDEYFGTLEARKSNKSLMQGYKSVLNSKQVEDNLTNFARCEPCHGRFGYRYPWQQYQKIGNLSRQCAYRIDALNGFLNNDIKTPKEIRSKIQEPCIKMSIETGKALKQLAISIQKMIPPTAAETHIATSKIYATNLKSMIKTKLWEDTNLFEVVPVVTVASLLLDVVSSIEKLGESIQELFTLAKFKNIESKVAAEDKKQVPQPCCNSSGPQHVITIVPKSIVL 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03860 441 Pfam Aluminium activated malate transporter 20 397 IPR020966 GO:0015743
Trre11g03860 441 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 6 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03860 Trre-Chr11 51798001 51800286 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g03860 11 401 Miscellaneous Gene Families AT1G08440 47.222 7.06e-139 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03860 K25841 - gmx:100787221 630.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g03860 11 51798001 51800286 Trre11g03860 11 51798001 51800286 ECH
Trre11g03860 11 51798001 51800286 Trre7g01387 7 10234712 10237711 PCT