Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01350 ATGGCGGAAGCCCTAAGCCCTAACAAACAAAGACTCCCTGTTGCAGCGCGAATCCAATCTCCAACCAGTCCATTCATATTAGGTTCCAATGATGACCAGCTCGAACGCGCTCAAGCACGTGCAGCACGCGCTGCCGCTATCCATCGCAAGAATCTTACCGTTTCTCAATCTCTTGATGCCAATTCCGATCCGTGTCTTAATAAACAGCAGATCTTCGATTTGTTCCAAAACTGCATCAAGCTCGCCAGCGAAAATAAAATTAATCAGAAAAATACTTGGGAGTTAAACTTGATTGATCATCTTACTGATATTATTAAAGCCGAAGAAGAAAATGATACAGAGACTAATTTTCAGAAGGCAAGCTGCACTCTAGAGGCTGGAGTCAAAATTTATTCATTAAGGGTGGATTCAGTGCATTCTGAGGCATATAAAGTCCTTGGTGGGATGAATAGAGCAGGCCAAGATGCTGAACAAGACACTACCCTGGAGGGTGTTAATGTTGAAAGTGGACAAGAAGGAGGCAGAAAAGAGACAGATAAAAAGTTGTCACCTTTGTCAACACTGGAACCATCTTTTGAGGTTCTCAACGTAAAGAAGTTTGATGCTGCATTTGTTGTGGATCCCCTCTATCGGCAGACAACTGCAAAATTTGATGAAGGAGGAGCCAAAGGTCTTTTAATGAATAATCTCGGTGTATATGGCGGATGTAGGGTGCTCTTTGATTCACAAGAAGTGCCTGCAAAGTGTATGGCAGGCCAAAATGAACCTGATATTTCAGATACCATTGATCTTTCTTTTGTCAGAGATTGTGTTGAGCAGATTGTATTGGAGATGCGCGTGAAGGATGAAATTTCTCCAACTCTCAGGACTATAGTAAACCAATTTGATGAAAATAATAAAAGGCCTACTGATTTTCAACTTCATGGTCAGAATTCAGTGGAAGAGCCTGGTGTTGATTTTACTTGTGAAAATGGCGCTGACAGAGAAGATTATGAGAACGGTGCGAACTGGAGTGATGATCATGATGACCAACCAGTTATTGCTGATCTAGACTCTAATGATGTAGATCCAAGTTTCCCTAGTTATCCTCAGGAAAATGAGTTATTTCCTTCCACAGAACCTGATATGGATGACAGATTCGAAAATGTTGATGGGTTCTTATTCTTGAGTCTGGGTTTTAATTCAAAACACAATGCATGGGCAGGCCCTGATCATTGGAAGTATAAAAAATCGAAAGTCTCTGAGGTTCAACCTACTTCTGAAGATGGGCCAACCCTGAAAACTAAGCAGACAAAGAGTAAGAGACAAGCCGAAGTTGATTTGGCTTTTGTAAATTCTCTGGAGAAAAACTTGTCGGATATATTTGCTCCTCCCAAGAATCCCAAAACATTACTTCTCCCTGAAAGCAGACCGTCTTGCAATACAAAACTTCCAGAGGACTGCCACTATCAGCCAGAAGAACTTATCAAGCTATTTCTTCTTCCGGATGTGAAGTGTCTTGGTAGGAGGGCAAAAAGATTCTCAGATTCAGAAGGATCCAGAGATCAATTCAATGAGAATGATACATTTCCTTCTTGGGATAATGGAAGTGCTTGTGGTGGTGATGAGGCTGGTGACTATGAAGGTGATTATCACAGTGATCTGGAAGACCCTGGCACTCTTATTACTCAGCCTCGTCAGGTCAGTAAAATCGAAGTCCAGTATGATAAAACGTCAAAACAAGTTGATGTTCAGGCACTAAAAGTTACTCTTTGGGACCATGTTCAAGCATATGATAAGCTTCCTCCTGTTCAGGGTCAAGAAGAAATAGTATCTTTCCGGAATTTATTGGCTAACTTTCCTGGCGATTGCAATGCCGCTGCAAACATCAGTGACATTTCTCCTCATCTGTGCTTCATATGTCTTCTGCATTTGGCAAATGAGAAAGGATTGAGCATTCAAAGTTTTCCCAACTTGGATGATCTTTCAATACGCCTTCCATATGTTGGCGATAGTGGAACAGTTTAG 2007 0.415 MAEALSPNKQRLPVAARIQSPTSPFILGSNDDQLERAQARAARAAAIHRKNLTVSQSLDANSDPCLNKQQIFDLFQNCIKLASENKINQKNTWELNLIDHLTDIIKAEEENDTETNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGMNRAGQDAEQDTTLEGVNVESGQEGGRKETDKKLSPLSTLEPSFEVLNVKKFDAAFVVDPLYRQTTAKFDEGGAKGLLMNNLGVYGGCRVLFDSQEVPAKCMAGQNEPDISDTIDLSFVRDCVEQIVLEMRVKDEISPTLRTIVNQFDENNKRPTDFQLHGQNSVEEPGVDFTCENGADREDYENGANWSDDHDDQPVIADLDSNDVDPSFPSYPQENELFPSTEPDMDDRFENVDGFLFLSLGFNSKHNAWAGPDHWKYKKSKVSEVQPTSEDGPTLKTKQTKSKRQAEVDLAFVNSLEKNLSDIFAPPKNPKTLLLPESRPSCNTKLPEDCHYQPEELIKLFLLPDVKCLGRRAKRFSDSEGSRDQFNENDTFPSWDNGSACGGDEAGDYEGDYHSDLEDPGTLITQPRQVSKIEVQYDKTSKQVDVQALKVTLWDHVQAYDKLPPVQGQEEIVSFRNLLANFPGDCNAAANISDISPHLCFICLLHLANEKGLSIQSFPNLDDLSIRLPYVGDSGTV 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01350 668 MobiDBLite consensus disorder prediction 509 552 - -
Trre7g01350 668 PANTHER CONDENSIN COMPLEX SUBUNIT 2 17 659 IPR022816 GO:0000796|GO:0007076
Trre7g01350 668 PIRSF Condensin_H 1 269 IPR022816 GO:0000796|GO:0007076
Trre7g01350 668 PIRSF Condensin_H 541 660 IPR022816 GO:0000796|GO:0007076
Trre7g01350 668 PIRSF Condensin_H 259 550 IPR022816 GO:0000796|GO:0007076
Trre7g01350 668 MobiDBLite consensus disorder prediction 153 183 - -
Trre7g01350 668 MobiDBLite consensus disorder prediction 324 344 - -
Trre7g01350 668 Pfam Condensin complex subunit 2 23 546 IPR022816 GO:0000796|GO:0007076
Trre7g01350 668 Pfam Condensin complex subunit 2 552 658 IPR022816 GO:0000796|GO:0007076
Trre7g01350 668 MobiDBLite consensus disorder prediction 414 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01350 Trre-Chr7 9836493 9840852 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01350 K06676 - gmx:100799781 1037.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g01350 7 9836493 9840852 Trre7g01350 7 9836493 9840852 ECH
Trre11g03887 11 52121816 52126165 Trre7g01350 7 9836493 9840852 PCT