Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01321 ATGTATATAGCAACAACAGGCTCTTCTCTTCTCAGAACAACAACAACAACCAAACCTAACAAACTCCTATTTTCTTCTCCCATTTCTAGAACCTTCTTACATCCTCCATCTTCTCTAACTTCCCACACTTCTCGATCCTTCTTTTCTTCTCTTCCACGCTTCAACCGTTGCCGCCTCCATTCTTCATCTCCTCTTACTCTCCGTCGTCAGGTCAGAGCCACCATTCCCGTCATAGAAAGCTTCCACCGCAAAATTGCCACCATGGCTAGTGAAAATCCTTTCGAGGGAAACTTGACTAGTCTTCCTAAGCCAGGTGGTGGCGAGTTTGGAAAATTCTACAGTCTTCCTTCTCTCAATGATTCAAGAATTGATAAGTTACCATACTCCATTAGAATTCTTCTTGAATCTGCCATTCGCAATTGCGATAATTTCCAAGTCACTAAAGAAGATGTTGAGAAGATTATTGATTGGGAAAACACTTCTACTAAGCAAGTTGAGATTCCTTTCAAGCCTGCTCGTGTTCTCTTGCAGGATTTTACCGGAGTCCCAGCTGTTGTTGACTTGGCTTGCATGCGAGATGCTATGAATAAGCTTGGCAGTGATTCAAATAAAATCAATCCTCTGGTTCCTGTTGATCTCGTTGTTGACCATTCAGTTCAAGTTGATGTGGCAAGGTCAGAAAATGCAGTGCAGGCTAATATGGAACTTGAATTCCAAAGAAACAAGGAGAGATTTGCTTTTCTTAAATGGGGGTCAACTGCATTCCGTAACATGCTCGTTGTTCCTCCTGGTTCTGGTATTGTACATCAGGTCAATCTTGAATATCTTGGACGGGTAGTTTTCAACAACGAAGGCTTACTCTATCCTGATAGTGTGGTTGGGACTGATTCACATACAACTATGATAGATGGGCTTGGTGTTGCTGGATGGGGTGTTGGAGGTATTGAAGCTGAGGCAGCAATGCTCGGTCAGCCTATGAGCATGGTTTTACCTGGAGTTGTTGGGTTCAAGCTATCTGGAAATTTGCGCAATGGTGTTACAGCAACTGACTTGGTTCTGACTGTGACACAGATTCTTAGGAAGCATGGTGTTGTAGGGAAATTTGTTGAATTTTATGGTGATGGTATGAGTAAATTATCTTTAGCTGACAGAGCTACTATTGCTAATATGTCTCCTGAATACGGTGCCACCATGGGCTTCTTCCCTGTGGATCATGTTACATTACAATATCTCAAGCTAACTGGGAGAAGTGATGAGACTGTGGAAATGATAGAGTCTTATCTAAGGGCAAACAGACTATTTGTTGACTATAATGAGCCGCAACAAGATAGGGTATATTCATCGTATCTGGAATTAAACCTGTCCGACGTAGAACCATGTATCTCAGGACCAAAGAGACCCCATGACCGGGTACCTTTGAAAGAAATGAAAGCCGATTGGCACCCTTGTCTTGATAACAAAGTTGGATTTAAGGGATTCGCTATACCAAAAGAGTTACAGGGTAAAGTTGCGAAATTTGATTTTCATGGGCAGCCAGCAGAGCTCAAGCATGGCAGTGTAGTGATTGCTGCAATCACAAGCTGTACGAATACATCAAACCCAAGTGTTATGCTTGGGGCTGGTCTTGTTGCGAAAAAGGCTCATGAGCTTGGTTTGCAGGTCAAGCCTTGGGTTAAAACAAGTCTTGCTCCAGGCTCTGGTGTTGTTACTAAATATCTACTCCAGAGTGGACTGCAAAAGTATTTAAATGAACAAGGTTTTCATATTGTTGGATTTGGCTGTACAACATGTATTGGTAATTCAGGGGATCTGCATGAATCTGTTGCTTCTGCCATCTCAGAAAATGACATTGTTGCAGCTGCTGTTCATCCCTTGACAAGAGCCAACTATCTTGCCTCACCTCCTTTGGTTGTTGCTTATGCTCTGGCTGGCACGGTTGATATTGACTTTGAGAAGGAGCCAATTGGAACGGGGAAGGATGGCAAGAATATCTACCTGAGGGATATCTGGCCATCTACTGAAGAAATCTCAGAGACTGTTCAATCTAGTGTGTTACCTGACATGTTCCGAAGTACATATGAATCTATCACAAAGGGAAACCCTATGTGGAACCAACTGCAAGTTCCAGCTGATACTCTCTACTCTTGGGACCCCAACTCAACATATATTCATGAACCTCCATACTTCAAGAACATGACCATGGACCCTCCTGGATCTCATGGTGTGAAAGACGCCTATTGTCTGCTAAACTTTGGTGACAGTATAACCACCGATCATATTTCTCCAGCTGGAAGCATTAACAAGGACAGTCCTGCTGCTAAATACCTACTAGAGCGCGGGGTTGAACGCAAGGACTTTAATTCTTATGGAAGTCGTCGTGGCAATGATGAGGTGATGGCGAGAGGAACTTTTGCCAACATTCGTCTTGTTAATAAGCTTTTAAACGGGGAAGTTGGCCCTAGGACAGTTCACATTCCAACTGGGGAGAAGCTTTATGTGTTTGATGCAGCAATGAGATACAAGGCTTCCGGGGAAGACACTATTGTACTAGCTGGAGCTGAATATGGCAGTGGAAGTTCTAGAGATTGGGCTGCCAAGGGTCCAATGTTATTGGGGGTCAAAGCTGTAATAGCTAAAAGTTTCGAGAGGATTCATCGTAGTAACTTGGTAGGAATGGGTATTATCCCTCTTTGCTACAAACTTGGGGAGGATGCAGACTCATTGGGATTGACTGGTCATGAACGTTATACAATTGATCTTCCAAATAAAATCAGTGAGATCAAGCCAGGCCAAGATGTCACAGTCACAACCGATAGTGGAAAATCTTTCACCTGCGTAGCGCGCTTTGACACCGAGGTGGAACTAGCTTACTTCAACCACGGAGGAATTCTTCCATATGTCATACATAACCTCATTAATCAGTGA 2925 0.4332 MYIATTGSSLLRTTTTTKPNKLLFSSPISRTFLHPPSSLTSHTSRSFFSSLPRFNRCRLHSSSPLTLRRQVRATIPVIESFHRKIATMASENPFEGNLTSLPKPGGGEFGKFYSLPSLNDSRIDKLPYSIRILLESAIRNCDNFQVTKEDVEKIIDWENTSTKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVVDHSVQVDVARSENAVQANMELEFQRNKERFAFLKWGSTAFRNMLVVPPGSGIVHQVNLEYLGRVVFNNEGLLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLPGVVGFKLSGNLRNGVTATDLVLTVTQILRKHGVVGKFVEFYGDGMSKLSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVEMIESYLRANRLFVDYNEPQQDRVYSSYLELNLSDVEPCISGPKRPHDRVPLKEMKADWHPCLDNKVGFKGFAIPKELQGKVAKFDFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKAHELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGFGCTTCIGNSGDLHESVASAISENDIVAAAVHPLTRANYLASPPLVVAYALAGTVDIDFEKEPIGTGKDGKNIYLRDIWPSTEEISETVQSSVLPDMFRSTYESITKGNPMWNQLQVPADTLYSWDPNSTYIHEPPYFKNMTMDPPGSHGVKDAYCLLNFGDSITTDHISPAGSINKDSPAAKYLLERGVERKDFNSYGSRRGNDEVMARGTFANIRLVNKLLNGEVGPRTVHIPTGEKLYVFDAAMRYKASGEDTIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCYKLGEDADSLGLTGHERYTIDLPNKISEIKPGQDVTVTTDSGKSFTCVARFDTEVELAYFNHGGILPYVIHNLINQ 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01321 974 FunFam Aconitate hydratase 92 459 - -
Trre7g01321 974 Pfam Aconitase family (aconitate hydratase) 152 644 IPR001030 -
Trre7g01321 974 ProSitePatterns Aconitase family signature 2. 586 599 IPR018136 -
Trre7g01321 974 Gene3D Aconitase, domain 4 737 973 IPR015928 -
Trre7g01321 974 SUPERFAMILY Aconitase iron-sulfur domain 106 709 IPR036008 -
Trre7g01321 974 PRINTS Aconitase family signature 459 473 IPR001030 -
Trre7g01321 974 PRINTS Aconitase family signature 363 376 IPR001030 -
Trre7g01321 974 PRINTS Aconitase family signature 258 266 IPR001030 -
Trre7g01321 974 PRINTS Aconitase family signature 524 535 IPR001030 -
Trre7g01321 974 PRINTS Aconitase family signature 234 247 IPR001030 -
Trre7g01321 974 PRINTS Aconitase family signature 287 300 IPR001030 -
Trre7g01321 974 PRINTS Aconitase family signature 301 316 IPR001030 -
Trre7g01321 974 PRINTS Aconitase family signature 377 390 IPR001030 -
Trre7g01321 974 PRINTS Aconitase family signature 586 599 IPR001030 -
Trre7g01321 974 Gene3D - 673 734 - -
Trre7g01321 974 Gene3D Aconitase, domain 3 91 459 IPR015931 -
Trre7g01321 974 Gene3D Aconitase, domain 3 460 672 IPR015931 -
Trre7g01321 974 SUPERFAMILY LeuD/IlvD-like 713 971 - -
Trre7g01321 974 CDD AcnA_IRP_Swivel 750 920 IPR044137 -
Trre7g01321 974 FunFam cytoplasmic aconitate hydratase 460 672 - -
Trre7g01321 974 Pfam Aconitase C-terminal domain 773 899 IPR000573 -
Trre7g01321 974 PANTHER ACONITASE/IRON-RESPONSIVE ELEMENT FAMILY MEMBER 86 971 IPR006249 -
Trre7g01321 974 CDD AcnA_IRP 173 646 - -
Trre7g01321 974 NCBIfam aconitate hydratase AcnA 110 972 IPR006249 -
Trre7g01321 974 ProSitePatterns Aconitase family signature 1. 520 536 IPR018136 -
Trre7g01321 974 FunFam Aconitate hydratase 736 973 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01321 Trre-Chr7 9561557 9568860 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01321 K01681 - gmx:100778506 1740.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g03916 11 52403523 52411032 Trre7g01321 7 9561557 9568860 PCT