Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01279 ATGCAGTTATTTCAGAAAAACACAAAAGCACAATTTTGTATTAATTTCATATTAGTAACATCTTCATTTTGTGGCTTTTATGTCCTTGCAACAATATTAATTTTAGGTACTTCAAATTCATCAAAGCTATTATTACATTTACATAATTCTTCATCACAAGATTTGTCCATAACTACAAACACAACTCTAGATAATATTGTGTTTGGTATTGCTTCTAGCAAAAGTTCATGGACAAAGAGAAAAGAGTATGTGAAACTATGGTGGAAAACCAATGCAATTAAAGGTTGTGTGTTTATGGATAGTTTACCTTCAAATGAAGATGACCCTTCTTCTCTTCCTCCACTTTGTGTCTCCGAAGACACTTCGCGGTTTCGGTACACTTGTAAAGGTGGACTTCGATCAGCTATACGTGTGGCGCGTGTAGTTGTGGAGACGGTTGCCTTGAATCATTCTGATGTGAAGTGGTATGTGTTTGGAGACGATGATACGGTTTTCTTTCCGGAGAATTTAGTTAAGACTCTTTCTAAATATGATCATGAGCTTTGGTATTATATTGGTGCACACTCTGAGATTTATGAGCAGAATCGGATTTTTGGTTTCGGAATGGCTTTTGGTGGTGCTGGTTTTGCTATAAGTTCTTCTTTGGCTAAAGTTTTGGCTAAGGTTTTTGATTCTTGTTTGGAAAGGTACCCTCATCTTTATGGAAGTGATGGAAGGGTTTACTCTTGCTTAGCAGAACTTGGTGTTGGATTGACACATGAACCAGGTTTTCATCAGGTTGATTTGACTGGAAACACCTTTGGCCTATTAGCATCACATCCAGTAACACCGTTATTATCTCTACATCATCCAGATTACACAGATCCAATTTTTCCAAACATGACAACAACAAAAGCCCTACAACATTTATTTGAAGCAGCAAATGTTGATTCTCAAAGGTTACTACAACAAACAATTTGCTATGACAAGTGGTTTTCATGGACAATTTCAGTTTCATGGGGTTATGCTGTTCAAGTATTTCCAAACCATATGTTTTTGCCTGATGTTGTTAATGTTCAAGAAACATTCAAGCAATGGAAAAAGGGAAATATGTTGGCAAAAGCATATAATTTTAATACAAAACCACTTCATTCTGATCCTTGTAAAAGATCTACTATCTTTTATTTTGATAGTGTTTCTTCTGGTAATGATGGCATCATAAGTAGCTATTATAAGAGATCTTTTCAGAATTGCTCAAAGAATTTGGTGTCTCCAAAGAAACTTGAAGTCATCAAAGTTGTTACTCATAAGCTAGACCTTGACATCAAACAGTTGCAGGCTCCAAGAAGGCACTGTTGTGATGTATTGCCTTCTAGTGCTGGTGACCAAATGGAAATTGCTGTTAGAGAATGCAAAGATGAAGAATTGATTTATATGCACTGA 1422 0.3586 MQLFQKNTKAQFCINFILVTSSFCGFYVLATILILGTSNSSKLLLHLHNSSSQDLSITTNTTLDNIVFGIASSKSSWTKRKEYVKLWWKTNAIKGCVFMDSLPSNEDDPSSLPPLCVSEDTSRFRYTCKGGLRSAIRVARVVVETVALNHSDVKWYVFGDDDTVFFPENLVKTLSKYDHELWYYIGAHSEIYEQNRIFGFGMAFGGAGFAISSSLAKVLAKVFDSCLERYPHLYGSDGRVYSCLAELGVGLTHEPGFHQVDLTGNTFGLLASHPVTPLLSLHHPDYTDPIFPNMTTTKALQHLFEAANVDSQRLLQQTICYDKWFSWTISVSWGYAVQVFPNHMFLPDVVNVQETFKQWKKGNMLAKAYNFNTKPLHSDPCKRSTIFYFDSVSSGNDGIISSYYKRSFQNCSKNLVSPKKLEVIKVVTHKLDLDIKQLQAPRRHCCDVLPSSAGDQMEIAVRECKDEELIYMH 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01279 473 FunFam Fringe-related protein-like 53 308 - -
Trre7g01279 473 Pfam Protein of unknown function, DUF604 194 446 IPR006740 -
Trre7g01279 473 PANTHER FRINGE-RELATED 16 470 - -
Trre7g01279 473 Gene3D - 55 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01279 Trre-Chr7 9203802 9206106 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01279 26 438 Glycosyltransferase AT1G05280 55.344 1.14e-169 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01279 - - gmx:100784602 747.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g01279 7 9203802 9206106 Trre11g03950 11 52780119 52782381 PCT